RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NUSAP1Q9BXS6 441 aaKnown RBP16.2■□□□□ 0.18
LDB3-208ENST00000623007 CADM1Q9BY67 442 aaKnown RBP16.2■□□□□ 0.18
LDB3-208ENST00000623007 NUF2Q9BZD4 464 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 SPATS2LQ9NUQ6 558 aaKnown RBP16.2■□□□□ 0.18
LDB3-208ENST00000623007 IL36AQ9UHA7 158 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 NEMP2A6NFY4 417 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 PER2O15055 1255 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 RAD51BO15315 384 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 NIPSNAP2O75323 286 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 PRNPP04156 253 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 OR56A5P0C7T3 313 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 XPAP23025 273 aaPredicted RBP16.19■□□□□ 0.18
LDB3-208ENST00000623007 PGM1P36871 562 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 ATP4BP51164 291 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 PGGT1BP53609 377 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 KDSRQ06136 332 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 KLF10Q13118 480 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 UBAP2LQ14157 1087 aaKnown RBP16.19■□□□□ 0.18
LDB3-208ENST00000623007 NAA25Q14CX7 972 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 OR4D1Q15615 310 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 UNC50Q53HI1 259 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 ZNF805Q5CZA5 627 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 NUDT18Q6ZVK8 323 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 Q6ZVU0 165 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 FRA10AC1Q70Z53 315 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 FAM13CQ8NE31 585 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 ASB16Q96NS5 453 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 CIPCQ9C0C6 399 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 SLCO3A1Q9UIG8 710 aa16.19■□□□□ 0.18
LDB3-208ENST00000623007 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 UPK3BL1B0FP48 263 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 UPK3BL2E5RIL1 263 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 E9PBE3 544 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 GAPDHSO14556 408 aaPredicted RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 DCXO43602 365 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 OR1I1O60431 355 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 KLHL41O60662 606 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 TM7SF2O76062 418 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 TSPAN12O95859 305 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 RPS17P08708 135 aaKnown RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 CISD3P0C7P0 127 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 KCNA5P22460 613 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 SPINT3P49223 89 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 CDKN1CP49918 316 aaPredicted RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 CHRNA6Q15825 494 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 ZNF697Q5TEC3 545 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 VWA5B1Q5TIE3 1220 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 ERAP2Q6P179 960 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 TMEM184AQ6ZMB5 413 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 SIDT2Q8NBJ9 832 aaKnown RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 OR56A4Q8NGH8 313 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 AGR3Q8TD06 166 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 MAPK15Q8TD08 544 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 UCMAQ8WVF2 138 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 ING5Q8WYH8 240 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 UTP4Q969X6 686 aaKnown RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 MRGPRX3Q96LB0 322 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 KLHL32Q96NJ5 620 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 FAM126AQ9BYI3 521 aaPredicted RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 UNKQ9C0B0 810 aaKnown RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 KCTD5Q9NXV2 234 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 IGLV3-16A0A075B6K0 115 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 CCDC85CA6NKD9 419 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 UBXN8O00124 270 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 BNIP3LO60238 219 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 GPC4O75487 556 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 ECI2O75521 394 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 AP2A2O94973 939 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 PRSS56P0CW18 603 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 CHRM1P11229 460 aaPredicted RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 HNRNPLP14866 589 aaKnown RBP eCLIP16.18■□□□□ 0.18
LDB3-208ENST00000623007 MYOGP15173 224 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 GKP32189 559 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 MAPK9P45984 424 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 NRIP1P48552 1158 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 PKNOX1P55347 436 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 CLCQ05315 142 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 KCNC3Q14003 757 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 SQLEQ14534 574 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 TSNQ15631 228 aaKnown RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 PDCD2Q16342 344 aaPredicted RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 TRMT5Q32P41 509 aaKnown RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 NXNQ6DKJ4 435 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 C16orf89Q6UX73 402 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 RINLQ6ZS11 566 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 CHSY3Q70JA7 882 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 RBM23Q86U06 439 aaKnown RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 NRSN1Q8IZ57 195 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 ZBTB2Q8N680 514 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 RBM15BQ8NDT2 890 aaKnown RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 ITFG1Q8TB96 612 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 PRR11Q96HE9 360 aaPredicted RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 SERPINI1Q99574 410 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 MIPEPQ99797 713 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 ZSCAN5AQ9BUG6 496 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 DEC1Q9P2X7 70 aa16.18■□□□□ 0.18
LDB3-208ENST00000623007 FNDC3AQ9Y2H6 1198 aaKnown RBP16.18■□□□□ 0.18
LDB3-208ENST00000623007 H0Y858 1186 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 SDHDO14521 159 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms