RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CELF5Q8N6W0 485 aaKnown RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 PCDH20Q8N6Y1 951 aaKnown RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 PHC3Q8NDX5 983 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 CALML6Q8TD86 181 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 LENG8Q96PV6 779 aaPredicted RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 MRPL46Q9H2W6 279 aaKnown RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 PRDM6Q9NQX0 595 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 DYRK4Q9NR20 520 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.44□□□□□ -0.74
VPS11-208ENST00000621676 IL17CQ9P0M4 197 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 TRPM6Q9BX84 2022 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 CCDC189A1A4V9 331 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 C16orf96A6NNT2 1141 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 ZNF197O14709 1029 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 GYG2O15488 501 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 SERPINE1P05121 402 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 GJA4P35212 333 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 MAGEA9P43362 315 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 CUL3Q13618 768 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 ADGRE1Q14246 886 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 PON2Q15165 354 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 PHKG1Q16816 387 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 KIF19Q2TAC6 998 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 PDE12Q6L8Q7 609 aaKnown RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 KIAA1211LQ6NV74 962 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 KIAA1324Q6UXG2 1013 aaKnown RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 DNAJC14Q6Y2X3 702 aaPredicted RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 ISCA2Q86U28 154 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 OR14C36Q8NHC7 312 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 PIP4K2CQ8TBX8 421 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 ACDQ96AP0 544 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 CENPTQ96BT3 561 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 OR2AG1Q9H205 316 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 THAP1Q9NVV9 213 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 ADAMTS6Q9UKP5 1117 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 SLC8A2Q9UPR5 921 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 ANGPTL3Q9Y5C1 460 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 CACNA1GO43497 2377 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 MID1O15344 667 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 NARSO43776 548 aaKnown RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 BAG2O95816 211 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 ITGALP20701 1170 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 CTSCP53634 463 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 TAF1AQ15573 450 aaPredicted RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 ZNF77Q15935 545 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 ELMSAN1Q6PJG2 1045 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 LRRC49Q8IUZ0 686 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 ZNF513Q8N8E2 541 aaPredicted RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 AP2M1Q96CW1 435 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 SORT1Q99523 831 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 HEPHQ9BQS7 1158 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 ILKAPQ9H0C8 392 aaPredicted RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 GMPR2Q9P2T1 348 aaKnown RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 TDRKHQ9Y2W6 561 aaKnown RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 ACTL7BQ9Y614 415 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 PTPRDP23468 1912 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 MROH6A6NGR9 719 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 VPS26AO75436 327 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 KLHL2O95198 593 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 KAT7O95251 611 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 RPSAP08865 295 aaKnown RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 PDHA2P29803 388 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 NFATC2Q13469 925 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 STARD3Q14849 445 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 CCSMST1Q4G0I0 132 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 RINLQ6ZS11 566 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 TRMT11Q7Z4G4 463 aaKnown RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 SCG3Q8WXD2 468 aaKnown RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 OVCA2Q8WZ82 227 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 ELMO1Q92556 727 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 TUBGCP3Q96CW5 907 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 SLC40A1Q9NP59 571 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 MRPL40Q9NQ50 206 aaKnown RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 PRAMEF33A0A0G2JMD5 474 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 RGSL1A5PLK6 1076 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 SLC7A4O43246 635 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 CDK14O94921 469 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 POP4O95707 220 aaKnown RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 GBAP04062 536 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 ZNF140P52738 457 aaPredicted RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 CORO7P57737 925 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 NCALDP61601 193 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 MEF2AQ02078 507 aaPredicted RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 NRG1Q02297 640 aaPredicted RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 AP5B1Q2VPB7 878 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 CTSL3PQ5NE16 218 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 SEL1L3Q68CR1 1132 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 USP45Q70EL2 814 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 PARS2Q7L3T8 475 aaKnown RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 PACS2Q86VP3 889 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 FBXO39Q8N4B4 442 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 PTCD2Q8WV60 388 aaKnown RBP10.43□□□□□ -0.74
VPS11-208ENST00000621676 SNX19Q92543 992 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 DCUN1D1Q96GG9 259 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 MFSD1Q9H3U5 465 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 HPS4Q9NQG7 708 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 IGSF5Q9NSI5 407 aa10.43□□□□□ -0.74
VPS11-208ENST00000621676 TDRD6O60522 2096 aaKnown RBP10.42□□□□□ -0.74
VPS11-208ENST00000621676 TBC1D3DA0A087WVF3 549 aa10.42□□□□□ -0.74
VPS11-208ENST00000621676 TBC1D3IA0A087WXS9 549 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms