RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 OR2T12Q8NG77 320 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 OR2L5Q8NG80 312 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 TCTEX1D2Q8WW35 142 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 P2RX7Q99572 595 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 OMDQ99983 421 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ILVBLA1L0T0 632 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 RFXANKO14593 260 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CYP17A1P05093 508 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 FABP3P05413 133 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 PRKACAP17612 351 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 GRIA4P48058 902 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 SEPHS1P49903 392 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 RAB10P61026 200 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 FOXC1Q12948 553 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 MFSD5Q6N075 450 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 RNF44Q7L0R7 432 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 PHC2Q8IXK0 858 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 FIBCD1Q8N539 461 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 POF1BQ8WVV4 589 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CDADC1Q9BWV3 514 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ALKBH4Q9NXW9 302 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 SRPK3Q9UPE1 567 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 PCDHGB5Q9Y5G0 923 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 COL5A2P05997 1499 aaPredicted RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 SLC33A1O00400 549 aaPredicted RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 XKRYO14609 159 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 OR1I1O60431 355 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 NRP2O60462 931 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CLK2P49760 499 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ABCA11PQ4W5N1 156 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 PITRM1Q5JRX3 1037 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 PPP1R15BQ5SWA1 713 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 BAIAP2L2Q6UXY1 529 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ZC3H7AQ8IWR0 971 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CPNE9Q8IYJ1 553 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ALLCQ8N6M5 410 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF420Q8TAQ5 688 aaPredicted RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 UBA3Q8TBC4 463 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ACER1Q8TDN7 264 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 HASPINQ8TF76 798 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 PRRG4Q9BZD6 226 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 NUDT15Q9NV35 164 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 VPS28Q9UK41 221 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 E9PCH4 1651 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ADGRB2O60241 1585 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 TBC1D3BA6NDS4 549 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 GIMD1P0DJR0 217 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 UBA1P22314 1058 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 SLC1A2P43004 574 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 RGS6P49758 472 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 MFSD10Q14728 455 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ACOX1Q15067 660 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 RNASEH2BQ5TBB1 312 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ZDHHC20Q5W0Z9 365 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 IFNL1Q8IU54 200 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 PSTKQ8IV42 348 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 OR2L3Q8NG85 312 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 POC1BQ8TC44 478 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ASB15Q8WXK1 588 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ELMO1Q92556 727 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 C7orf26Q96N11 449 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 TAAR1Q96RJ0 339 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 LGR4Q9BXB1 951 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CCRL2O00421 344 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SSX4O60224 188 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 TP53P04637 393 aaPredicted RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SLC2A2P11168 524 aaPredicted RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 EIF4BP23588 611 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 MGAT1P26572 445 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 LCN1P31025 176 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 MAGEA6P43360 314 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 CCR4P51679 360 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 FGL1Q08830 312 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 DPYSL3Q14195 570 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 POU6F1Q14863 301 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 DLG2Q15700 870 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 WSCD2Q2TBF2 565 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ZBED5Q49AG3 693 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 GPAT3Q53EU6 434 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 OR5T3Q8NGG3 340 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 TSEN15Q8WW01 171 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 TCEAL3Q969E4 200 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ACSS3Q9H6R3 686 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 RPL36Q9Y3U8 105 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 A0A0A0MRY4 1105 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 GSG1L2A8MUP6 293 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 IFNA1P01562 189 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 PSKH1P11801 424 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SRCP12931 536 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ETS2P15036 469 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 DNASE1L1P49184 302 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SRSF11Q05519 484 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 AUHQ13825 339 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 MPZL3Q6UWV2 235 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SERPINA13PQ6UXR4 307 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 TMEM126BQ8IUX1 230 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 TOP1MTQ969P6 601 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 CNDP2Q96KP4 475 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ZDHHC15Q96MV8 337 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SPATA13Q96N96 652 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms