RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 FGF1P05230 155 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 OGNP20774 298 aaKnown RBP20.24■□□□□ 0.83
NEK3-208ENST00000618534 ELK4P28324 431 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 IL12AP29459 219 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 FMO4P31512 558 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 CCL14Q16627 93 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 ZIK1Q3SY52 487 aaPredicted RBP20.24■□□□□ 0.83
NEK3-208ENST00000618534 TMEM214Q6NUQ4 689 aaKnown RBP20.24■□□□□ 0.83
NEK3-208ENST00000618534 UGT3A1Q6NUS8 523 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 FAM43BQ6ZT52 329 aaPredicted RBP20.24■□□□□ 0.83
NEK3-208ENST00000618534 TERB1Q8NA31 727 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 TANKQ92844 425 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 BORCS5Q969J3 196 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 TLR9Q9NR96 1032 aa20.24■□□□□ 0.83
NEK3-208ENST00000618534 ABI2Q9NYB9 513 aaPredicted RBP20.24■□□□□ 0.83
NEK3-208ENST00000618534 ENPP3O14638 875 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 HLA-DPA1P20036 260 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 ACVRL1P37023 503 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 GPR15P49685 360 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 TYSND1Q2T9J0 566 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 RAP1GAP2Q684P5 730 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 FBXL22Q6P050 247 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 ZBTB46Q86UZ6 589 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 MUS81Q96NY9 551 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 BRINP2Q9C0B6 783 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 POLR1EQ9GZS1 481 aaKnown RBP20.23■□□□□ 0.83
NEK3-208ENST00000618534 SYTL2Q9HCH5 934 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 TRIM64BA6NI03 449 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 SNX2O60749 519 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 INHBBP09529 407 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 MRPL19P49406 292 aaKnown RBP20.23■□□□□ 0.83
NEK3-208ENST00000618534 YWHAHQ04917 246 aaPredicted RBP20.23■□□□□ 0.83
NEK3-208ENST00000618534 EFEMP1Q12805 493 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 ZNF829Q3KNS6 432 aaPredicted RBP20.23■□□□□ 0.83
NEK3-208ENST00000618534 SLC39A12Q504Y0 691 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 FAM117BQ6P1L5 589 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 SLC2A7Q6PXP3 512 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 MRPL10Q7Z7H8 261 aaKnown RBP20.23■□□□□ 0.83
NEK3-208ENST00000618534 KLHL23Q8NBE8 558 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 BRSK1Q8TDC3 778 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 BPIFB1Q8TDL5 484 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 PEX13Q92968 403 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 FUBP1Q96AE4 644 aaKnown RBP20.23■□□□□ 0.83
NEK3-208ENST00000618534 ESAMQ96AP7 390 aa20.23■□□□□ 0.83
NEK3-208ENST00000618534 NUSAP1Q9BXS6 441 aaKnown RBP20.23■□□□□ 0.83
NEK3-208ENST00000618534 YTHDF1Q9BYJ9 559 aaKnown RBP20.23■□□□□ 0.83
NEK3-208ENST00000618534 TDRD15B5MCY1 1934 aaKnown RBP20.22■□□□□ 0.83
NEK3-208ENST00000618534 TYW5A2RUC4 315 aaKnown RBP20.22■□□□□ 0.83
NEK3-208ENST00000618534 BOLA2-SMG1P6H3BVE0 249 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 MGEA5O60502 916 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 RAMP2O60895 175 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 ESRRBO95718 433 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 CPNE6O95741 557 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 ALBP02768 609 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 MATN1P21941 496 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 UGT1A1P22309 533 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 UGT1A4P22310 534 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 HTR1EP28566 365 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 UGT1A3P35503 534 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 UGT1A5P35504 534 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 IL10RBQ08334 325 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 GRIK2Q13002 908 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 RBBP7Q16576 425 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 ANKRD26P1Q6NSI1 321 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 USP50Q70EL3 339 aaPredicted RBP20.22■□□□□ 0.83
NEK3-208ENST00000618534 RALGPS2Q86X27 583 aaPredicted RBP20.22■□□□□ 0.83
NEK3-208ENST00000618534 DCBLD1Q8N8Z6 715 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 TAS2R13Q9NYV9 303 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 PCTPQ9UKL6 214 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 CENPFP49454 3210 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 IGLV3-10A0A075B6K4 115 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 LCHNA4D1U4 455 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 SHMT2P34897 504 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 EMX2Q04743 252 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 RAD51Q06609 339 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 ILF2Q12905 390 aaKnown RBP20.22■□□□□ 0.83
NEK3-208ENST00000618534 SERINC3Q13530 473 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 DDR2Q16832 855 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 PDCD4Q53EL6 469 aaKnown RBP20.22■□□□□ 0.83
NEK3-208ENST00000618534 OR13F1Q8NGS4 319 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 ZC3H15Q8WU90 426 aaKnown RBP20.22■□□□□ 0.83
NEK3-208ENST00000618534 CDKN2AIPNLQ96HQ2 116 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 GPR21Q99679 349 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 MTG1Q9BT17 334 aaPredicted RBP20.22■□□□□ 0.83
NEK3-208ENST00000618534 BDH2Q9BUT1 245 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 NTN4Q9HB63 628 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 FANCEQ9HB96 536 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 ZFYVE28Q9HCC9 887 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 GALPQ9UBC7 116 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 SUN2Q9UH99 717 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 ZNF711Q9Y462 761 aa20.22■□□□□ 0.83
NEK3-208ENST00000618534 BTN3A1O00481 513 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 TBX18O95935 607 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 CHEK2O96017 543 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 UROSP10746 265 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 ZNF182P17025 639 aaPredicted RBP20.21■□□□□ 0.83
NEK3-208ENST00000618534 EEF1B2P24534 225 aaKnown RBP20.21■□□□□ 0.83
NEK3-208ENST00000618534 PBX3P40426 434 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 ERVK-8P63133 956 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 HABP4Q5JVS0 413 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms