RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 TMCO1Q9UM00 188 aa16.66■□□□□ 0.26
TRAPPC3-210ENST00000617904 CACNA1AO00555 2505 aa16.66■□□□□ 0.26
TRAPPC3-210ENST00000617904 ANKRD36A6QL64 1941 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 KIF26AQ9ULI4 1882 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 MYLKQ15746 1914 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 MED19A0JLT2 244 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 EDF1O60869 148 aaKnown RBP16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 SMIM24O75264 130 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 ADH1BP00325 375 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 SERPINE1P05121 402 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 ELFN1P0C7U0 828 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 BPIP17213 487 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 CHRM3P20309 590 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 NSG1P42857 185 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 SPINT3P49223 89 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 RGS4P49798 205 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 IRX4P78413 519 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 XIAPP98170 497 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 GRSF1Q12849 480 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 CHI3L2Q15782 390 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 TTLL9Q3SXZ7 439 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 C9orf64Q5T6V5 341 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 LRRC8EQ6NSJ5 796 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 CDHR3Q6ZTQ4 885 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 FAM47EQ6ZV65 393 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 DGLUCYQ7Z3D6 616 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 LDB1Q86U70 411 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 SERPINA9Q86WD7 417 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 SLC22A9Q8IVM8 553 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 ZNF513Q8N8E2 541 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 KCTD4Q8WVF5 259 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 KCNJ9Q92806 393 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 SIKE1Q9BRV8 207 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 IER2Q9BTL4 223 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 FAM126AQ9BYI3 521 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 TMEM245Q9H330 911 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 FAM83DQ9H4H8 585 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 PCDH12Q9NPG4 1184 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 NCDNQ9UBB6 729 aa16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 NFKBIL1Q9UBC1 381 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC3-210ENST00000617904 OTOL1A6NHN0 477 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 TMEM114B3SHH9 223 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 KPNA5O15131 536 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 TRIM13O60858 407 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 TGDSO95455 350 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 CCDC166P0CW27 439 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 CHRM1P11229 460 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 CHRNB1P11230 501 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 TIMP2P16035 220 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 DRD1P21728 446 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 BGNP21810 368 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 ACRV1P26436 265 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 NAA20P61599 178 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 CSHL1Q14406 222 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 CDKN3Q16667 212 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 RBM20Q5T481 1227 aaKnown RBP16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 PSAPL1Q6NUJ1 521 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 C16orf46Q6P387 395 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 WDR75Q8IWA0 830 aaKnown RBP16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 PHTF2Q8N3S3 785 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 SEC16BQ96JE7 1060 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 C7orf26Q96N11 449 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 COPS8Q99627 209 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 ZSCAN5AQ9BUG6 496 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 SPATA16Q9BXB7 569 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 RABEP2Q9H5N1 569 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 IL26Q9NPH9 171 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 THAP1Q9NVV9 213 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 ZDHHC3Q9NYG2 299 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 PPM1HQ9ULR3 514 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 ARL2BPQ9Y2Y0 163 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 STON1Q9Y6Q2 735 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 DMXL1Q9Y485 3027 aa16.64■□□□□ 0.25
TRAPPC3-210ENST00000617904 CEP250Q9BV73 2442 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 ERICH4A6NGS2 130 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 SYCE1LA8MT33 242 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 A8MX80 341 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 MAGEC1O60732 1142 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 OR56A5P0C7T3 313 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 SERPINB5P36952 375 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 CSRP3P50461 194 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 GALK1P51570 392 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 IL2P60568 153 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 PTSQ03393 145 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 GAS6Q14393 721 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 ACOX1Q15067 660 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 RSPO4Q2I0M5 234 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 ZYG11AQ6WRX3 759 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 ERN2Q76MJ5 926 aaKnown RBP16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 TSPAN33Q86UF1 283 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 ZSWIM9Q86XI8 627 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 CEP97Q8IW35 865 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 NXPE1Q8N323 547 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 AFAP1L2Q8N4X5 818 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 TRAM1L1Q8N609 369 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 HDAC8Q9BY41 377 aa16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 ZCCHC2Q9C0B9 1178 aaKnown RBP16.63■□□□□ 0.25
TRAPPC3-210ENST00000617904 WDR87Q6ZQQ6 2873 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 TRBV5-4A0A0C4DH59 114 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 PABPN1LA6NDY0 278 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms