RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 PEX13Q92968 403 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 TRIB3Q96RU7 358 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 C9orf16Q9BUW7 83 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 PDFQ9HBH1 243 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 ZFYVE28Q9HCC9 887 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 BPIFA1Q9NP55 256 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 TLR8Q9NR97 1041 aaKnown RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 INTS7Q9NVH2 962 aaKnown RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 INTS10Q9NVR2 710 aaKnown RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 NLE1Q9NVX2 485 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 TDRD15B5MCY1 1934 aaKnown RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 CROCCQ5TZA2 2017 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 A0A087WXM4 84 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 CLOCKO15516 846 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 SNX2O60749 519 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 NIPSNAP2O75323 286 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 VPS4BO75351 444 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 PYGLP06737 847 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 STT3AP46977 705 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 ZFP36L2P47974 494 aaKnown RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 ZNF140P52738 457 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 RCAN2Q14206 197 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 ATP6AP1Q15904 470 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 SPATA19Q7Z5L4 167 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 RALGPS2Q86X27 583 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 CDYL2Q8N8U2 506 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 GIPC2Q8TF65 315 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 NUDT8Q8WV74 236 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 BIRC8Q96P09 236 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 HBEGFQ99075 208 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 TRIM54Q9BYV2 358 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 CRISPLD1Q9H336 500 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 SARS2Q9NP81 518 aaKnown RBP11.7□□□□□ -0.54
C11orf54-215ENST00000617482 AIG1Q9NVV5 245 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 PCDHGC4Q9Y5F7 938 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 HTTP42858 3142 aa11.7□□□□□ -0.54
C11orf54-215ENST00000617482 MYO16Q9Y6X6 1858 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 SYCE1LA8MT33 242 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 TLR5O60602 858 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 RASAL1O95294 804 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 ESRRBO95718 433 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 CHEK2O96017 543 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 RPS17P08708 135 aaKnown RBP11.69□□□□□ -0.54
C11orf54-215ENST00000617482 CYBAP13498 195 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 IL12AP29459 219 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 SLC6A4P31645 630 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 MAPKAPK2P49137 400 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 GALK1P51570 392 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 POLR2JP52435 117 aaKnown RBP11.69□□□□□ -0.54
C11orf54-215ENST00000617482 HK3P52790 923 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 ESRRGP62508 458 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 PLIN5Q00G26 463 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 CTBSQ01459 385 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 DCTN2Q13561 401 aaKnown RBP11.69□□□□□ -0.54
C11orf54-215ENST00000617482 PLCL1Q15111 1095 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 KCTD21Q4G0X4 260 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 FAM171A1Q5VUB5 890 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 NANOGP8Q6NSW7 305 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 PSAPL1Q6NUJ1 521 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 COLGALT2Q8IYK4 626 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 FNDC5Q8NAU1 212 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 DCUN1D5Q9BTE7 237 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 CINPQ9BW66 212 aaPredicted RBP11.69□□□□□ -0.54
C11orf54-215ENST00000617482 NANOGQ9H9S0 305 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 EIF2B4Q9UI10 523 aaKnown RBP11.69□□□□□ -0.54
C11orf54-215ENST00000617482 PCTPQ9UKL6 214 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 FADS3Q9Y5Q0 445 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 DOCK4Q8N1I0 1966 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 SCN10AQ9Y5Y9 1956 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 TCRBV5S2A0A599 114 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 IQCF5A8MTL0 148 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 F5H5T6 163 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 GIPC1O14908 333 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 OR4F21O95013 312 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 SNAP29O95721 258 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 C1RP00736 705 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 IGLV3-27P01718 113 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 GPIP06744 558 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 PRR35P0CG20 571 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 UROSP10746 265 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 HOXD9P28356 352 aaPredicted RBP11.69□□□□□ -0.54
C11orf54-215ENST00000617482 RFC2P35250 354 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 ZNF157P51786 506 aaPredicted RBP11.69□□□□□ -0.54
C11orf54-215ENST00000617482 EMP3P54852 163 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 RPS24P62847 133 aaKnown RBP11.69□□□□□ -0.54
C11orf54-215ENST00000617482 FOXM1Q08050 763 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 DSC1Q08554 894 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 PLA2G4EQ3MJ16 856 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 TMTC4Q5T4D3 741 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 OGFOD2Q6N063 350 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 SLC2A7Q6PXP3 512 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 AFTPHQ6ULP2 937 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 EFHBQ8N7U6 833 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 OR52B6Q8NGF0 335 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 TRIB2Q92519 343 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 ISOC1Q96CN7 298 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 VPS50Q96JG6 964 aa11.69□□□□□ -0.54
C11orf54-215ENST00000617482 FAM193BQ96PV7 902 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms