RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 KLC2Q9H0B6 622 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 TMEM168Q9H0V1 697 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 FGF22Q9HCT0 170 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 PCDH12Q9NPG4 1184 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 UBAP1Q9NZ09 502 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 CNOT8Q9UFF9 292 aaKnown RBP8.53□□□□□ -1.04
GPC6-202ENST00000617456 AMACRQ9UHK6 382 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 MKL2Q9ULH7 1088 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 PAIP2BQ9ULR5 123 aaKnown RBP8.53□□□□□ -1.04
GPC6-202ENST00000617456 CAPN11Q9UMQ6 739 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 ZNF148Q9UQR1 794 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 PLAAQ9Y263 795 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 CARD8Q9Y2G2 431 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 MRFAP1Q9Y605 127 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 CHD5Q8TDI0 1954 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 LRRK1Q38SD2 2015 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 ARHGEF17Q96PE2 2063 aaPredicted RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 TMEM202A6NGA9 273 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 RHPN2P1A8MT19 583 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 CACNB4O00305 520 aaPredicted RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 PDE2AO00408 941 aaPredicted RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 DDX3XO00571 662 aaKnown RBP eCLIP8.52□□□□□ -1.05
GPC6-202ENST00000617456 TNFRSF10CO14798 259 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 NKX2-8O15522 239 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 B4GAT1O43505 415 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 SOCS5O75159 536 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 LRCH4O75427 683 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 PALMO75781 387 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 CPNE6O95741 557 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 SERPING1P05155 500 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 EZRP15311 586 aaKnown RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 PNLIPP16233 465 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 ERCC2P18074 760 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 MPSTP25325 297 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 OAS2P29728 719 aaKnown RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 MIPP30301 263 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 HNRNPH3P31942 346 aaKnown RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 SERPINB6P35237 376 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 PBX1P40424 430 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 LIG3P49916 1009 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 B4GALNT1Q00973 533 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 MTM1Q13496 603 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 DPYSQ14117 519 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 RASA2Q15283 850 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 CFAP58Q5T655 872 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 HGSNATQ68CP4 663 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 CAPRIN2Q6IMN6 1127 aaKnown RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 BPHLQ86WA6 291 aaPredicted RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 CACNA2D3Q8IZS8 1091 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 BBS5Q8N3I7 341 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 ESX1Q8N693 406 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 ARFGAP1Q8N6T3 406 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 OR56A4Q8NGH8 313 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 C9orf43Q8TAL5 461 aaPredicted RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 FAM71BQ8TC56 605 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 ART4Q93070 314 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 EXOC2Q96KP1 924 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 CCDC74BQ96LY2 380 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 PSMG3-AS1Q96PY0 264 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 SLC39A8Q9C0K1 460 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 ACBD3Q9H3P7 528 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 DHX35Q9H5Z1 703 aaKnown RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 LRRC4CQ9HCJ2 640 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 CYP4F12Q9HCS2 524 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 PAPOLBQ9NRJ5 636 aaKnown RBP8.52□□□□□ -1.05
GPC6-202ENST00000617456 HAUS2Q9NVX0 235 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 TAS2R14Q9NYV8 317 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 LHX3Q9UBR4 397 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 IP6K2Q9UHH9 426 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 ANAPC2Q9UJX6 822 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 B3GALT1Q9Y5Z6 326 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 DGKBQ9Y6T7 804 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 NBPF19A0A087WUL8 3843 aa8.52□□□□□ -1.05
GPC6-202ENST00000617456 IGHV5-10-1A0A0J9YXX1 117 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 A6NHS1 94 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 ZNF891A8MT65 544 aaPredicted RBP8.51□□□□□ -1.05
GPC6-202ENST00000617456 H3BRJ5 948 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 J3KR12 359 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 TRAFD1O14545 582 aaPredicted RBP8.51□□□□□ -1.05
GPC6-202ENST00000617456 NUDT21O43809 227 aaKnown RBP8.51□□□□□ -1.05
GPC6-202ENST00000617456 DUX1O43812 170 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 RAD1O60671 282 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 SMNDC1O75940 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
GPC6-202ENST00000617456 FGF3P11487 239 aaPredicted RBP8.51□□□□□ -1.05
GPC6-202ENST00000617456 KELP23276 732 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 TEAD1P28347 426 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 UGT1A3P35503 534 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 TRIM23P36406 574 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 MMP12P39900 470 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 ARL4AP40617 200 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 PPM1FP49593 454 aaPredicted RBP8.51□□□□□ -1.05
GPC6-202ENST00000617456 ARSDP51689 593 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 CDH6P55285 790 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 UBASH3AP57075 661 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 BCL2L1Q07817 233 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 ZBTB17Q13105 803 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 PEX6Q13608 980 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 NKAIN2Q5VXU1 208 aa8.51□□□□□ -1.05
GPC6-202ENST00000617456 CYP4V2Q6ZWL3 525 aaPredicted RBP8.51□□□□□ -1.05
GPC6-202ENST00000617456 POLNQ7Z5Q5 900 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms