RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TERB1Q8NA31 727 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 GMLQ99445 158 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 LMF2Q9BU23 707 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 PCED1AQ9H1Q7 454 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PIH1D3Q9NQM4 214 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 DNAI1Q9UI46 699 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ACAD8Q9UKU7 415 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 USP15Q9Y4E8 981 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 GFRA2O00451 464 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SPAG6O75602 509 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 VAV1P15498 845 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 NQO1P15559 274 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 NFKB2Q00653 900 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 B4GALNT4Q76KP1 1039 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ASB11Q8WXH4 323 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PCDHB16Q9NRJ7 776 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PTBP2Q9UKA9 531 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 NAALAD2Q9Y3Q0 740 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PIGBOS1A0A0B4J2F0 54 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PDXKO00764 312 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ECEL1O95672 775 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PDHA1P08559 390 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ATP5F1P24539 256 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 AGTR2P50052 363 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 RPS7P62081 194 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 ECT2LQ008S8 904 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 BLOC1S3Q6QNY0 202 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 AFTPHQ6ULP2 937 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 MKL1Q969V6 931 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 LGR4Q9BXB1 951 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PFDN2Q9UHV9 154 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 GGA2Q9UJY4 613 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PRODHO43272 600 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ZMPSTE24O75844 475 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 EPHA4P54764 986 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 UBAP2LQ14157 1087 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 HIF1AQ16665 826 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 LRIT3Q3SXY7 679 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 INTS11Q5TA45 600 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 PIK3R6Q5UE93 754 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 RBM43Q6ZSC3 357 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 CCDC80Q76M96 950 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PIK3C3Q8NEB9 887 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 BTBD6Q96KE9 485 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ATG10Q9H0Y0 220 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 OPTCQ9UBM4 332 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 GRIP1Q9Y3R0 1128 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 IKZF1Q13422 519 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CBWD6Q4V339 395 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 RALGPS1Q5JS13 557 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 C22orf15Q8WYQ4 148 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 NRBF2Q96F24 287 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ZSCAN5AQ9BUG6 496 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 AP1M1Q9BXS5 423 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CYP4F12Q9HCS2 524 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ALOX15BO15296 676 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PHGDHO43175 533 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 B3GALT2O43825 422 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 USP1O94782 785 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 EDN1P05305 212 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 UGT1A6P19224 532 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ATP11AP98196 1134 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PTPRCAPQ14761 206 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CDKL4Q5MAI5 379 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 BRAT1Q6PJG6 821 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 G2E3Q7L622 706 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 IPMKQ8NFU5 416 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 IFI44Q8TCB0 444 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 FRMD6Q96NE9 622 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 TKTL2Q9H0I9 626 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 GOLPH3LQ9H4A5 285 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 KLC4Q9NSK0 619 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ZSWIM5Q9P217 1185 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ARL5CA6NH57 179 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CD3EAPO15446 510 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 SLC7A4O43246 635 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 GLCEO94923 617 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 KAT7O95251 611 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 BDNFP23560 247 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 MAT2AP31153 395 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 SKIV2L2P42285 1042 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 TLR1Q15399 786 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 RFTN2Q52LD8 501 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 SLC8B1Q6J4K2 584 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 BTBD9Q96Q07 612 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 DPH2Q9BQC3 489 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 TBC1D10AQ9BXI6 508 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 GPR83Q9NYM4 423 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 KLF13Q9Y2Y9 288 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 PAX7P23759 505 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 TGFBR3Q03167 851 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 BRD3Q15059 726 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 TEAD2Q15562 447 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 BORAQ6PGQ7 559 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 UNQ9370/PRO34162Q6UXP9 181 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 TMEM132CQ8N3T6 1108 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ENAHQ8N8S7 591 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 SGCDQ92629 289 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 GOLPH3Q9H4A6 298 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 NPIPA2E9PIF3 369 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms