RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, human

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CADM1-222	ENST00000616271	ACVR1	Q04771	509 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	DNAJC3	Q13217	504 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	GTF2H3	Q13889	308 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	DHX34	Q14147	1143 aa	Known RBP	18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	GPR33	Q49SQ1	333 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	KHDC1	Q4VXA5	237 aa	Known RBP	18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	PCID2	Q5JVF3	399 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	ZNF648	Q5T619	568 aa	Predicted RBP	18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	GPRC6A	Q5T6X5	926 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	ANKRD22	Q5VYY1	191 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	ARMC3	Q5W041	872 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	NRROS	Q86YC3	692 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	MCU	Q8NE86	351 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	CDKN2AIPNL	Q96HQ2	116 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	ZNHIT2	Q9UHR6	403 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	CRLS1	Q9UJA2	301 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	GPR34	Q9UPC5	381 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	18.18	■□□□□ 0.5
CADM1-222	ENST00000616271		U3KQA8	63 aa		18.18	■□□□□ 0.5
CADM1-222	ENST00000616271	RP1	P56715	2156 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	CCDC78	A2IDD5	438 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	KIF2A	O00139	706 aa	Predicted RBP	18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	DNALI1	O14645	258 aa	Predicted RBP	18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	CDK14	O94921	469 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	MLN	P12872	115 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	AK4	P27144	223 aa	Predicted RBP	18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	CA5A	P35218	305 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	RPIA	P49247	311 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	TMEM115	Q12893	351 aa	Predicted RBP	18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	ILK	Q13418	452 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	SLCO6A1	Q86UG4	719 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	LRRTM4	Q86VH4	590 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	JAML	Q86YT9	394 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	PPIL6	Q8IXY8	311 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	SLC35F3	Q8IY50	421 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	ARL10	Q8N8L6	244 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	NAT8L	Q8N9F0	302 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	OR13J1	Q8NGT2	312 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	TTC25	Q96NG3	672 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	MRM3	Q9HC36	420 aa	Known RBP	18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	XAB2	Q9HCS7	855 aa	Known RBP	18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	ST14	Q9Y5Y6	855 aa		18.17	■□□□□ 0.5
CADM1-222	ENST00000616271	TRBV5-4	A0A0C4DH59	114 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	KMO	O15229	486 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	RFPL3	O75679	317 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	TRIM16	O95361	564 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	ADRB1	P08588	477 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	CDK4	P11802	303 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	MGAT1	P26572	445 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	AKT1	P31749	480 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	ACTR1B	P42025	376 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	ARSD	P51689	593 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	ACTR1A	P61163	376 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	CACNG1	Q06432	222 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	NR0B2	Q15466	257 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	ZRANB3	Q5FWF4	1079 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	RNASEH2B	Q5TBB1	312 aa	Known RBP	18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	OGFOD3	Q6PK18	319 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	SLC30A9	Q6PML9	568 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	CHST15	Q7LFX5	561 aa	Predicted RBP	18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	PCGF5	Q86SE9	256 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	NXPE1	Q8N323	547 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	KY	Q8NBH2	561 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	FAM46D	Q8NEK8	389 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	SPATA4	Q8NEY3	305 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	TAAR2	Q9P1P5	351 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	PRKAB1	Q9Y478	270 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	PLEKHM1	Q9Y4G2	1056 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	ASXL3	Q9C0F0	2248 aa		18.16	■□□□□ 0.5
CADM1-222	ENST00000616271	SPTBN2	O15020	2390 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	TTI1	O43156	1089 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	ACP5	P13686	325 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	MSH3	P20585	1137 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	CLCNKA	P51800	687 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	CKAP4	Q07065	602 aa	Known RBP	18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	AFTPH	Q6ULP2	937 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	CRTC3	Q6UUV7	619 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	ZNF572	Q7Z3I7	529 aa	Predicted RBP	18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	CAND1	Q86VP6	1230 aa	Known RBP	18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	HOOK3	Q86VS8	718 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	GPR156	Q8NFN8	814 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	HEXDC	Q8WVB3	486 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	ADAMTS14	Q8WXS8	1223 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	NAT6	Q93015	286 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	ZNF514	Q96K75	400 aa	Predicted RBP	18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	ZNF778	Q96MU6	729 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	SERPINB12	Q96P63	405 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	KRT12	Q99456	494 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	TIMM29	Q9BSF4	260 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	DPEP2	Q9H4A9	486 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	SYBU	Q9NX95	663 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	SIRPG	Q9P1W8	387 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	SLC2A6	Q9UGQ3	507 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	CDC23	Q9UJX2	597 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	BPTF	Q12830	3046 aa		18.15	■□□□□ 0.5
CADM1-222	ENST00000616271	COL27A1	Q8IZC6	1860 aa	Predicted RBP	18.14	■□□□□ 0.49
CADM1-222	ENST00000616271	CCDC162P	A2VCL2	907 aa		18.14	■□□□□ 0.49
CADM1-222	ENST00000616271	EME2	A4GXA9	379 aa	Predicted RBP	18.14	■□□□□ 0.49
CADM1-222	ENST00000616271		B4DGG1	531 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms