RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 KIAA1024LP59773 190 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 XRCC4Q13426 336 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 TRADDQ15628 312 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 C3orf38Q5JPI3 329 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 FBXO38Q6PIJ6 1188 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 GPR156Q8NFN8 814 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 GPBAR1Q8TDU6 330 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SLC37A2Q8TED4 501 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 TBL1YQ9BQ87 522 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 DDX47Q9H0S4 455 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SLC17A6Q9P2U8 582 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 LRIT1Q9P2V4 623 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SPASTQ9UBP0 616 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 TSR3Q9UJK0 312 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 DGKBQ9Y6T7 804 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 FASNP49327 2511 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 C5orf60A6NFR6 353 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 A8MU76 341 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 MIF4GDA9UHW6 222 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 RPLP0P05388 317 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ATXN8OSP0DMR3 200 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SDHBP21912 280 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 EIF2S3P41091 472 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ETV5P41161 510 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 CSE1LP55060 971 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 TGIF1Q15583 401 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SNAP47Q5SQN1 464 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 FNBP1LQ5T0N5 605 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ARHGEF18Q6ZSZ5 1173 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SYCE1Q8N0S2 351 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ARL14Q8N4G2 192 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 OR13J1Q8NGT2 312 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 MAPK15Q8TD08 544 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ZDHHC1Q8WTX9 485 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 GLYATL1Q969I3 302 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 OSBPL9Q96SU4 736 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 PHPT1Q9NRX4 125 aaPredicted RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.63□□□□□ -1.512e-8■■■□□ 15.4
CPNE3-208ENST00000614678 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 MARCH4Q9P2E8 410 aaPredicted RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ZNF624Q9P2J8 865 aaPredicted RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 RUVBL2Q9Y230 463 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SLC30A1Q9Y6M5 507 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ANKRD12Q6UB98 2062 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SDK2Q58EX2 2172 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 HACD1B0YJ81 288 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 KIF1CO43896 1103 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 PRAMEF10O60809 474 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ITGB6P18564 788 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 PDHA2P29803 388 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ARCN1P48444 511 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ZNF140P52738 457 aaPredicted RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 BASP1P80723 227 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SHC2P98077 582 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 TMEM115Q12893 351 aaPredicted RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 PTK2BQ14289 1009 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 HLTFQ14527 1009 aaKnown RBP eCLIP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ZNF789Q5FWF6 425 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 GPRC6AQ5T6X5 926 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SEL1L2Q5TEA6 688 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ZCCHC8Q6NZY4 707 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ADAMTSL4Q6UY14 1074 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 CERS6Q6ZMG9 384 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 CDKL3Q8IVW4 592 aaPredicted RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 CCDC112Q8NEF3 446 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 GPR150Q8NGU9 434 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 LKAAEAR1Q8TD35 194 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 BTN2A2Q8WVV5 523 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 HNRNPLLQ8WVV9 542 aaKnown RBP5.63□□□□□ -1.51
CPNE3-208ENST00000614678 DCBLD2Q96PD2 775 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 C1QTNF7Q9BXJ2 289 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 AMACRQ9UHK6 382 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 LCMT1Q9UIC8 334 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 SATB2Q9UPW6 733 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 EFR3BQ9Y2G0 817 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 MSRB2Q9Y3D2 182 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 ENTPD2Q9Y5L3 495 aa5.63□□□□□ -1.51
CPNE3-208ENST00000614678 FAM208BQ5VWN6 2430 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 SEC16AO15027 2179 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 CSO75390 466 aaKnown RBP5.62□□□□□ -1.51
CPNE3-208ENST00000614678 CDK14O94921 469 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 MT-CO3P00414 261 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 CCL4P13236 92 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 ZNF30P17039 623 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 TYRP1P17643 537 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 MPP3Q13368 585 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 MFSD3Q96ES6 412 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 ABCG4Q9H172 646 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 CLCA2Q9UQC9 943 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 APOBEC2Q9Y235 224 aaKnown RBP5.62□□□□□ -1.51
CPNE3-208ENST00000614678 ZNF106Q9H2Y7 1883 aaKnown RBP5.62□□□□□ -1.51
CPNE3-208ENST00000614678 GLYATL1P3A0A0U1RQE8 302 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 A6NCN8 305 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 PSMD11O00231 422 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 GRID2O43424 1007 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 NUAK1O60285 661 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 BRINP1O60477 761 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 ARNTP27540 789 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 NMBRP28336 390 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 ABCG1P45844 678 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms