RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 UNC50Q53HI1 259 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ACSBG2Q5FVE4 666 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TCHHL1Q5QJ38 904 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 UGT3A1Q6NUS8 523 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 EPGNQ6UW88 154 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SERPINA13PQ6UXR4 307 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 GDPD4Q6W3E5 623 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 RIPOR1Q6ZS17 1223 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 USP45Q70EL2 814 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 HSD11B1LQ7Z5J1 315 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TRIM74Q86UV6 250 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 GPR65Q8IYL9 337 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CNPY4Q8N129 248 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 STK40Q8N2I9 435 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 FBXO39Q8N4B4 442 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TEX9Q8N6V9 391 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CELF5Q8N6W0 485 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 KDM1BQ8NB78 822 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 FAM13CQ8NE31 585 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 GPR150Q8NGU9 434 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 RAB3IL1Q8TBN0 382 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CD200R1Q8TD46 325 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 DTX3LQ8TDB6 740 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 BPIFB1Q8TDL5 484 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 FOXJ1Q92949 421 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 VOPP1Q96AW1 172 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PTCD3Q96EY7 689 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 SCRN2Q96FV2 425 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 FAM161BQ96MY7 647 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 EGFL8Q99944 293 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CCDC106Q9BWC9 280 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PLA2G2FQ9BZM2 168 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PCDH12Q9NPG4 1184 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CACNA2D2Q9NY47 1150 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 HACD3Q9P035 362 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 STK39Q9UEW8 545 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 MID2Q9UJV3 735 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 HS3ST2Q9Y278 367 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CHD5Q8TDI0 1954 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 CAPN8A6NHC0 703 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 C5orf67F2Z3F1 127 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 SPECC1L-ADORA2AF8WAN1 911 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 AXIN1O15169 862 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 GSC2O15499 205 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 SNX2O60749 519 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 CRCPO75575 148 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 ATP6V1G2O95670 118 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 PYGLP06737 847 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 LINC00032P0C843 101 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 TPBGLP0DKB5 382 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 ZNF7P17097 686 aaPredicted RBP3.4□□□□□ -1.86
LIG4-205ENST00000614526 SOX11P35716 441 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 PGM1P36871 562 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 SEC13P55735 322 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 ST8SIA6P61647 398 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 BTKQ06187 659 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 SLC20A2Q08357 652 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 TCEA2Q15560 299 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 RBBP7Q16576 425 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 SLC44A4Q53GD3 710 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 ZNF678Q5SXM1 525 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 LAYNQ6UX15 382 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 TPRG1Q6ZUI0 275 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 FRMD7Q6ZUT3 714 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 FRA10AC1Q70Z53 315 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 PELI3Q8N2H9 469 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 LMNTD1Q8N9Z9 388 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 OR9I1Q8NGQ6 314 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 STAG3L4Q8TBR4 150 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 RDH11Q8TC12 318 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 WDR60Q8WVS4 1066 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.4□□□□□ -1.86
LIG4-205ENST00000614526 ATP6V1E2Q96A05 226 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 FUBP1Q96AE4 644 aaKnown RBP3.4□□□□□ -1.86
LIG4-205ENST00000614526 CHFRQ96EP1 664 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 C3orf30Q96M34 536 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 ASB16Q96NS5 453 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 HEPHQ9BQS7 1158 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 BTBD10Q9BSF8 475 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 LRMDAQ9H2I8 198 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 GSTO2Q9H4Y5 243 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 RETREG1Q9H6L5 497 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 SYTL2Q9HCH5 934 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 INTS10Q9NVR2 710 aaKnown RBP3.4□□□□□ -1.86
LIG4-205ENST00000614526 ELOVL2Q9NXB9 296 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 ZDHHC7Q9NXF8 308 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 CCDC167Q9P0B6 97 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 DEC1Q9P2X7 70 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 EIF2B4Q9UI10 523 aaKnown RBP3.4□□□□□ -1.86
LIG4-205ENST00000614526 ZMYM5Q9UJ78 669 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 ADAMTS6Q9UKP5 1117 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 CDYLQ9Y232 598 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 RWDD3Q9Y3V2 267 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 TRAF6Q9Y4K3 522 aa3.4□□□□□ -1.86
LIG4-205ENST00000614526 USP34Q70CQ2 3546 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 CFAP73A6NFT4 308 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 CAPN14A8MX76 684 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 TMEM114B3SHH9 223 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 SCAMP1O15126 338 aa3.4□□□□□ -1.87
LIG4-205ENST00000614526 PFDN6O15212 129 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms