RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 F5H5T6 163 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MOCS2O96007 188 aaPredicted RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FUCA1P04066 466 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GSTT2P0CG29 244 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GSTT2BP0CG30 244 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PCNAP12004 261 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ATF6P18850 670 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CLCN4P51793 760 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HERVK_113P63132 956 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CREB5Q02930 508 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TRAP1Q12931 704 aaKnown RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DNASE1L3Q13609 305 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GRM2Q14416 872 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PPP1R3AQ16821 1122 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 COQ5Q5HYK3 327 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 AARS2Q5JTZ9 985 aaKnown RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 C10orf120Q5SQS8 335 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CENPSQ8N2Z9 138 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MAGEE2Q8TD90 523 aaPredicted RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TSPEARQ8WU66 669 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 AARSD1Q9BTE6 412 aaKnown RBP10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ERVK-6Q9BXR3 956 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DERL2Q9GZP9 239 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 STARD7Q9NQZ5 370 aa10.79□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SLC12A8A0AV02 714 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GLP2RO95838 553 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 OR1E1P30953 314 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ATP5C1P36542 298 aaKnown RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 STC1P52823 247 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CDKN2DP55273 166 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FPGSQ05932 587 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZNF789Q5FWF6 425 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TPGS2Q68CL5 300 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZNF549Q6P9A3 640 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 LARP4Q71RC2 724 aaKnown RBP eCLIP10.78□□□□□ -0.684e-11■■■■■ 31
SENP3-EIF4A1-201ENST00000614237 FAM217AQ8IXS0 508 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CANT1Q8WVQ1 401 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HERC2P3Q9BVR0 1158 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 EXD2Q9NVH0 621 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 EVLQ9UI08 416 aaPredicted RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FNDC3AQ9Y2H6 1198 aaKnown RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 COPG1Q9Y678 874 aaKnown RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CD3EAPO15446 510 aaKnown RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 BCAS2O75934 225 aaPredicted RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 H6PDO95479 791 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SERPINF2P08697 491 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CHRM3P20309 590 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PSME3P61289 254 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RELAQ04206 551 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PIWIL3Q7Z3Z3 882 aaKnown RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TICAM1Q8IUC6 712 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SPPL2CQ8IUH8 684 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZC3H7AQ8IWR0 971 aaKnown RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TTC9BQ8N6N2 239 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HDAC10Q969S8 669 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ISOC1Q96CN7 298 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HEPHQ9BQS7 1158 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FBRSL1Q9HCM7 1045 aaKnown RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TIMMDC1Q9NPL8 285 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.78□□□□□ -0.685e-9■■■■□ 21.8
SENP3-EIF4A1-201ENST00000614237 OBSL1O75147 1896 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SOCS2O14508 198 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MUSKO15146 869 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TLR5O60602 858 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NCK1P16333 377 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HOXD12P35452 270 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SLC11A2P49281 568 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ARSDP51689 593 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ATP6V0D1P61421 351 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RTP2Q5QGT7 225 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RNF165Q6ZSG1 346 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GOLM1Q8NBJ4 401 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 VPS50Q96JG6 964 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RPRD1AQ96P16 312 aaPredicted RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SEMA3CQ99985 751 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ITM2CQ9NQX7 267 aa10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SUCOQ9UBS9 1254 aaKnown RBP10.78□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZNF840PA6NDX5 716 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 BBIP1A8MTZ0 92 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 PTGES3LE9PB15 166 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 STX16O14662 325 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 ACOT8O14734 319 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 AURKAO14965 403 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 VPS4BO75351 444 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 CDH3P22223 829 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 SLC6A4P31645 630 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 SLC7A2P52569 658 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 STX5Q13190 355 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 LRP8Q14114 963 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 INO80DQ53TQ3 878 aaPredicted RBP10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 TBCELQ5QJ74 424 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 SDHAF4Q5VUM1 108 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 CUZD1Q86UP6 607 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 AHI1Q8N157 1196 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 OR4L1Q8NH43 312 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 ANKRD49Q8WVL7 239 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 KIAA1191Q96A73 305 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 PLEKHA8Q96JA3 519 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 KLHL5Q96PQ7 755 aa10.77□□□□□ -0.69
SENP3-EIF4A1-201ENST00000614237 ATOH8Q96SQ7 321 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms