RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 MARCH7Q9H992 704 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 SEMA4BQ9NPR2 832 aaPredicted RBP10.78□□□□□ -0.68
FAM3A-221ENST00000612856 THAP1Q9NVV9 213 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 EBF1Q9UH73 591 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 FBXO5Q9UKT4 447 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 RWDD3Q9Y3V2 267 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 TOR1BO14657 336 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 DNAJA2O60884 412 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 TCEA3O75764 348 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 L1CAMP32004 1257 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ZNF132P52740 706 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 TPTEP56180 551 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 GPX6P59796 221 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 UAP1L1Q3KQV9 507 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 SLC2A7Q6PXP3 512 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 SPRED2Q7Z698 418 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ERI1Q8IV48 349 aaKnown RBP10.78□□□□□ -0.68
FAM3A-221ENST00000612856 HDDC3Q8N4P3 179 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 RAB42Q8N4Z0 105 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 KYQ8NBH2 561 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 OR13C4Q8NGS5 318 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 PPP1R14BQ96C90 147 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 SLC22A12Q96S37 553 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 CEP44Q9C0F1 390 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 WDR55Q9H6Y2 383 aaPredicted RBP10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ZFYVE1Q9HBF4 777 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ASF1AQ9Y294 204 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 AP4S1Q9Y587 144 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 FADS3Q9Y5Q0 445 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 GNG14A0A1W2PPG7 69 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 SH3PXD2BA1X283 911 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 FUOMA2VDF0 154 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 TRIM64CA6NLI5 447 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 KCNH1O95259 989 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 RASGRP1O95267 797 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 PAK4O96013 591 aaPredicted RBP10.77□□□□□ -0.68
FAM3A-221ENST00000612856 COX4I1P13073 169 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 RHOQP17081 205 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 CDH2P19022 906 aaPredicted RBP10.77□□□□□ -0.68
FAM3A-221ENST00000612856 JAK1P23458 1154 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 SOAT1P35610 550 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 MLLT6P55198 1093 aaPredicted RBP10.77□□□□□ -0.68
FAM3A-221ENST00000612856 ARPC4P59998 168 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 TBCCQ15814 346 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 FUT11Q495W5 492 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 AGAP9Q5VTM2 703 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 FRMD7Q6ZUT3 714 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 DENND6AQ8IWF6 608 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 PRSS58Q8IYP2 241 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 TAMM41Q96BW9 452 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 AP2M1Q96CW1 435 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 AHCYL2Q96HN2 611 aaKnown RBP10.77□□□□□ -0.68
FAM3A-221ENST00000612856 PLEKHA8Q96JA3 519 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 TUBA8Q9NY65 449 aaPredicted RBP10.77□□□□□ -0.68
FAM3A-221ENST00000612856 CDC14AQ9UNH5 594 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 KCTD3Q9Y597 815 aa10.77□□□□□ -0.68
FAM3A-221ENST00000612856 FAM95CA0A1B0GW59 222 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 HEPACAM2A8MVW5 462 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 H0Y858 1186 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 CKMT2P17540 419 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 PROZP22891 400 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 SERPINB1P30740 379 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 NKX2-5P52952 324 aaPredicted RBP10.77□□□□□ -0.69
FAM3A-221ENST00000612856 SMARCB1Q12824 385 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 CCNIQ14094 377 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 CYP2A13Q16696 494 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 SPDYE7PQ495Y7 208 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 UGT2A3Q6UWM9 527 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 ARFGAP1Q8N6T3 406 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 NRBF2Q96F24 287 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 CNDP1Q96KN2 507 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 BTBD9Q96Q07 612 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 CCDC3Q9BQI4 270 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 ATG10Q9H0Y0 220 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 ZNF576Q9H609 170 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 CATSPERZQ9NTU4 200 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 TAS2R13Q9NYV9 303 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 DLGAP3O95886 979 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 ABCB1P08183 1280 aaPredicted RBP10.77□□□□□ -0.69
FAM3A-221ENST00000612856 S100A1P23297 94 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 GP5P40197 560 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 BCAP31P51572 246 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 CREB5Q02930 508 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 MLLT1Q03111 559 aaPredicted RBP10.77□□□□□ -0.69
FAM3A-221ENST00000612856 PTK2BQ14289 1009 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 TCEAL5Q5H9L2 206 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 PPM1JQ5JR12 505 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 TRMT10BQ6PF06 316 aaKnown RBP10.77□□□□□ -0.69
FAM3A-221ENST00000612856 C16orf89Q6UX73 402 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 PHTF2Q8N3S3 785 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 KCTD4Q8WVF5 259 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 COL26A1Q96A83 441 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 RCN3Q96D15 328 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 MYO19Q96H55 970 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 LENG8Q96PV6 779 aaPredicted RBP10.77□□□□□ -0.69
FAM3A-221ENST00000612856 CLSTN3Q9BQT9 956 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 GTPBP2Q9BX10 602 aaKnown RBP10.77□□□□□ -0.69
FAM3A-221ENST00000612856 ABCG4Q9H172 646 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 NOL11Q9H8H0 719 aaKnown RBP10.77□□□□□ -0.69
FAM3A-221ENST00000612856 CXorf21Q9HAI6 301 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms