RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 OR52E8Q6IFG1 317 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 SPESP1Q6UW49 350 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TBC1D21Q8IYX1 336 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ARL14EPQ8N8R7 260 aaPredicted RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 TRPV1Q8NER1 839 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 RHEBL1Q8TAI7 183 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 UBXN10Q96LJ8 280 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TSSK3Q96PN8 268 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 RANBP9Q96S59 729 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 CYP2S1Q96SQ9 504 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 UGT2B28Q9BY64 529 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 EPB41L1Q9H4G0 881 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ALG2Q9H553 416 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 COMMD8Q9NX08 183 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 NUDT4Q9NZJ9 180 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 GNPTGQ9UJJ9 305 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 GLYATL1P3A0A0U1RQE8 302 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 MT-ND1P03886 318 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 UGT2B4P06133 528 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 GPIP06744 558 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 PCNAP12004 261 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 ERVK-8P63133 956 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 GPR180Q86V85 440 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 SIDT2Q8NBJ9 832 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 FBXO30Q8TB52 745 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 SPATA16Q9BXB7 569 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 CFAP97Q9P2B7 532 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 MAGEL2Q9UJ55 1249 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 NUMBLQ9Y6R0 609 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 TMEM88BA6NKF7 163 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 WASH4PA8MWX3 477 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 ENPP3O14638 875 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 RNASEH1O60930 286 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 ZNF682O95780 498 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 HSPA7P48741 367 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 GSK3BP49841 420 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 OCA2Q04671 838 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 EPS8Q12929 822 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 TUBB3Q13509 450 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 UNC50Q53HI1 259 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 ATXN7L2Q5T6C5 722 aaPredicted RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 TXNDC8Q6A555 127 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 PLD4Q96BZ4 506 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 CAPNS2Q96L46 248 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 POLR3BQ9NW08 1133 aaPredicted RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 TMCO1Q9UM00 188 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 MYO7AQ13402 2215 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 FDXRP22570 491 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 POLR2LP62875 67 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 TRAP1Q12931 704 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 HSF5Q4G112 596 aaPredicted RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 C6orf52Q5T4I8 152 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 RBM44Q6ZP01 1051 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 USP45Q70EL2 814 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 SPATA19Q7Z5L4 167 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 DNAJB7Q7Z6W7 309 aaPredicted RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 SERPINA9Q86WD7 417 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 PKP2Q99959 881 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 DERL2Q9GZP9 239 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 NSUN3Q9H649 340 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 COQ10BQ9H8M1 238 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 PIDD1Q9HB75 910 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 TBC1D30Q9Y2I9 924 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 ASB3Q9Y575 518 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 ZNF840PA6NDX5 716 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 LDB2O43679 373 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 GJB5O95377 273 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 CNPP09543 421 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 PPM1AP35813 382 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 POLR2JP52435 117 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 GLYATQ6IB77 296 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 AHI1Q8N157 1196 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 LEMD2Q8NC56 503 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 SH3KBP1Q96B97 665 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 ADI1Q9BV57 179 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 POLR1BQ9H9Y6 1135 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 POPDC3Q9HBV1 291 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 SPG21Q9NZD8 308 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 SUCOQ9UBS9 1254 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 MAP3K13O43283 966 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 TBC1D4O60343 1298 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 RECQL5O94762 991 aaPredicted RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 WEE1P30291 646 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 BIRC2Q13490 618 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 DCTN2Q13561 401 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 CLLU1OSQ5K130 101 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 TPGS2Q68CL5 300 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 ELMSAN1Q6PJG2 1045 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 RNF19BQ6ZMZ0 732 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 PDSS2Q86YH6 399 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 TMEM126BQ8IUX1 230 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 SLC15A3Q8IY34 581 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 SYTL1Q8IYJ3 562 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 NSUN5Q96P11 429 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 KCNA7Q96RP8 456 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 CLK4Q9HAZ1 481 aaKnown RBP6.32□□□□□ -1.4
SNX13-213ENST00000611725 IGSF5Q9NSI5 407 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 VPS51Q9UID3 782 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 INVSQ9Y283 1065 aa6.32□□□□□ -1.4
SNX13-213ENST00000611725 A0A1W2PP18 115 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms