RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 NR1D2Q14995 579 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 C16orf72Q14CZ0 275 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 SEPT7Q16181 437 aaKnown RBP12.14□□□□□ -0.47
CTSA-210ENST00000606000 PHF19Q5T6S3 580 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 ZNF574Q6ZN55 896 aaPredicted RBP12.14□□□□□ -0.47
CTSA-210ENST00000606000 RAB11FIP2Q7L804 512 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 ZNF547Q8IVP9 402 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 SPACA3Q8IXA5 215 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 SFRP1Q8N474 314 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 FAM71DQ8N9W8 422 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 RCBTB1Q8NDN9 531 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 WDR36Q8NI36 951 aaKnown RBP12.14□□□□□ -0.47
CTSA-210ENST00000606000 CCDC97Q96F63 343 aaPredicted RBP12.14□□□□□ -0.47
CTSA-210ENST00000606000 ZNF578Q96N58 590 aaPredicted RBP12.14□□□□□ -0.47
CTSA-210ENST00000606000 SLC46A1Q96NT5 459 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 TMEM121Q9BTD3 319 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 OSGEPL1Q9H4B0 414 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 RMI1Q9H9A7 625 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 UGT1A7Q9HAW7 530 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 UGT1A10Q9HAW8 530 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 UGT1A8Q9HAW9 530 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 PRDM8Q9NQV8 689 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 RAD18Q9NS91 495 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 KLC4Q9NSK0 619 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 SCHIP1Q9P0W5 487 aaPredicted RBP12.14□□□□□ -0.47
CTSA-210ENST00000606000 DNAJC16Q9Y2G8 782 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 LOXL2Q9Y4K0 774 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 PCDHGA8Q9Y5G5 932 aa12.14□□□□□ -0.47
CTSA-210ENST00000606000 IGHV1OR21-1A0A087WYE8 117 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 GLYATL1P3A0A0U1RQE8 302 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 CDRT15L2A8MXV6 281 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 CCL22O00626 93 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 PLD2O14939 933 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 CHUKO15111 745 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 RRP8O43159 456 aaKnown RBP12.13□□□□□ -0.47
CTSA-210ENST00000606000 ANXA9O76027 345 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 METTL18O95568 372 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 RBMS1P29558 406 aaKnown RBP12.13□□□□□ -0.47
CTSA-210ENST00000606000 CETN2P41208 172 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 TNNT3P45378 269 aaPredicted RBP12.13□□□□□ -0.47
CTSA-210ENST00000606000 GSDMDP57764 484 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 CCZ1BP86790 482 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 CCZ1P86791 482 aaPredicted RBP12.13□□□□□ -0.47
CTSA-210ENST00000606000 MSLNQ13421 630 aaPredicted RBP12.13□□□□□ -0.47
CTSA-210ENST00000606000 NFATC2Q13469 925 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 KCTD19Q17RG1 926 aaPredicted RBP12.13□□□□□ -0.47
CTSA-210ENST00000606000 INSCQ1MX18 579 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.13□□□□□ -0.47
CTSA-210ENST00000606000 PDPK2PQ6A1A2 396 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 DENND5AQ6IQ26 1287 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 RANBP10Q6VN20 620 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 LRRC69Q6ZNQ3 347 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 PRUNE1Q86TP1 453 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 LSMEM2Q8N112 164 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 TXLNBQ8N3L3 684 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 FBXO39Q8N4B4 442 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 OR13C4Q8NGS5 318 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 SLC35B2Q8TB61 432 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 GRAMD1AQ96CP6 724 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 CCDC74BQ96LY2 380 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 TMEM74Q96NL1 305 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 VPS35Q96QK1 796 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 SRPK1Q96SB4 655 aaKnown RBP12.13□□□□□ -0.47
CTSA-210ENST00000606000 TRABDQ9H4I3 376 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 LZTFL1Q9NQ48 299 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 THSD1Q9NS62 852 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 PIH1D1Q9NWS0 290 aaKnown RBP12.13□□□□□ -0.47
CTSA-210ENST00000606000 HACD3Q9P035 362 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 PISDQ9UG56 409 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 FKBPLQ9UIM3 349 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 CFAP47Q6ZTR5 3102 aa12.13□□□□□ -0.47
CTSA-210ENST00000606000 PRAMEF33A0A0G2JMD5 474 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 IGHV5-10-1A0A0J9YXX1 117 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 STK10O94804 968 aaKnown RBP12.12□□□□□ -0.47
CTSA-210ENST00000606000 CDK14O94921 469 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 CPNE6O95741 557 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 F3P13726 295 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 ZNF7P17097 686 aaPredicted RBP12.12□□□□□ -0.47
CTSA-210ENST00000606000 FASLGP48023 281 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 CTSCP53634 463 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 DRG2P55039 364 aaKnown RBP12.12□□□□□ -0.47
CTSA-210ENST00000606000 ERVPABLB-1P60509 514 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 TMPRSS15P98073 1019 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 HHEXQ03014 270 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 TLE3Q04726 772 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 TMEM115Q12893 351 aaPredicted RBP12.12□□□□□ -0.47
CTSA-210ENST00000606000 PRPSAP1Q14558 356 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 IYDQ6PHW0 289 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 IGF2-ASQ6U949 168 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 C11orf96Q7Z7L8 435 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 LRRTM4Q86VH4 590 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 RNF10Q8N5U6 811 aaKnown RBP12.12□□□□□ -0.47
CTSA-210ENST00000606000 RASGEF1AQ8N9B8 481 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 ZNF248Q8NDW4 579 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 OR4K2Q8NGD2 314 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 KCNE4Q8WWG9 221 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 PMEPA1Q969W9 287 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 TBL1YQ9BQ87 522 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms