RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 KIAA2013Q8IYS2 634 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 UBQLNLQ8IYU4 475 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 NDUFAF2Q8N183 169 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SCML4Q8N228 414 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF786Q8N393 782 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CARNMT1Q8N4J0 409 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM26EQ8N5C1 309 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF781Q8N8C0 355 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 KIAA1958Q8N8K9 716 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ANKRD53Q8N9V6 530 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 TDRD5Q8NAT2 981 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 HIPK4Q8NE63 616 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRPV3Q8NET8 790 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR10Z1Q8NGY1 313 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 GABPB2Q8TAK5 448 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM45AQ8TCE6 357 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 BLOC1S5Q8TDH9 187 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 LRTOMTQ8WZ04 291 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 LPGAT1Q92604 370 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 HDAC2Q92769 488 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 NCLNQ969V3 563 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ATP6V1E2Q96A05 226 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCDC124Q96CT7 223 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 GIMAP5Q96F15 307 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 PIGSQ96S52 555 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYP2S1Q96SQ9 504 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 HSD17B14Q9BPX1 270 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SENP7Q9BQF6 1050 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MECRQ9BV79 373 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 KIFC1Q9BW19 673 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEZ6LQ9BYH1 1024 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 NXF2Q9GZY0 626 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ILKAPQ9H0C8 392 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM168Q9H0V1 697 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 VPS33BQ9H267 617 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCNN2Q9H2S1 579 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MMP27Q9H306 513 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 LRRC40Q9H9A6 602 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 COG4Q9H9E3 785 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYP4F11Q9HBI6 524 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZBTB26Q9HCK0 441 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 XPNPEP1Q9NQW7 623 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 HOMER2Q9NSB8 354 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 C20orf96Q9NUD7 363 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 PNPOQ9NVS9 261 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SMOXQ9NWM0 555 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 COMMD8Q9NX08 183 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SNTG2Q9NY99 539 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM181Q9P2C4 612 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 IFT80Q9P2H3 777 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MID2Q9UJV3 735 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ADAM28Q9UKQ2 775 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 FBXO5Q9UKT4 447 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 EMCNQ9ULC0 261 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 VANGL2Q9ULK5 521 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 COA3Q9Y2R0 106 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 RBMX2Q9Y388 322 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 RAP2CQ9Y3L5 183 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCDHGB7Q9Y5F8 929 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCDHGA3Q9Y5H0 932 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MAU2Q9Y6X3 613 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 FER1L6Q2WGJ9 1857 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 DDX60LQ5H9U9 1706 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 RGPD3A6NKT7 1758 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 RGPD4Q7Z3J3 1758 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 LTBP3Q9NS15 1303 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 HEATR9A2RTY3 570 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 LINC00862A6NCI5 91 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 C9orf118A6NHY6 69 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 C3orf70A6NLC5 250 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR5K4A6NMS3 321 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PI4K2BG5E9Z4 385 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMX2-CTNND1H3BSU7 103 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 hCG_2039718K7EN88 272 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 SGK1O00141 431 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 SOCS2O14508 198 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYB561D2O14569 222 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC9A3R1O14745 358 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 AIM2O14862 343 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 KATNA1O75449 491 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 DAB1O75553 588 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCNKO75909 580 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM63AO94886 807 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCNK2O95069 426 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PRSS23O95084 383 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 GABARAPO95166 117 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PRKCGP05129 697 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 APOA4P06727 396 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 GPIP06744 558 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PGK2P07205 417 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 KITP10721 976 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 MLNP12872 115 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 HSD17B1P14061 328 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 IL1R1P14778 569 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 CFL1P23528 166 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 FASP25445 335 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PTX3P26022 381 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ETV6P41212 452 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 EIF2DP41214 584 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms