RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 BBS12Q6ZW61 710 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 SLCO6A1Q86UG4 719 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 TRIM69Q86WT6 500 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 HORMAD1Q86X24 394 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 LRRC49Q8IUZ0 686 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 ACTL9Q8TC94 416 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 CXorf40AQ8TE69 158 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 TFB1MQ8WVM0 346 aaKnown RBP8.82□□□□□ -1
SH3D19-212ENST00000604440 HNRNPLLQ8WVV9 542 aaKnown RBP8.82□□□□□ -1
SH3D19-212ENST00000604440 HES6Q96HZ4 224 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 TSGA13Q96PP4 275 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 TUBGCP5Q96RT8 1024 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 ZDHHC5Q9C0B5 715 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 POLR1EQ9GZS1 481 aaKnown RBP8.82□□□□□ -1
SH3D19-212ENST00000604440 WNT10AQ9GZT5 417 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 BRD8Q9H0E9 1235 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 CAAP1Q9H8G2 361 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 IL21RQ9HBE5 538 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 DKK3Q9UBP4 350 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 SUSD2Q9UGT4 822 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 APOBEC2Q9Y235 224 aaKnown RBP8.82□□□□□ -1
SH3D19-212ENST00000604440 CHKBQ9Y259 395 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 RAI2Q9Y5P3 530 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 SAR1BQ9Y6B6 198 aa8.82□□□□□ -1
SH3D19-212ENST00000604440 LRRK1Q38SD2 2015 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 TSPAN11A1L157 253 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 APOC4-APOC2K7ER74 178 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 TRAFD1O14545 582 aaPredicted RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 AREL1O15033 823 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 LATO43561 262 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 PAK4O96013 591 aaPredicted RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 APOC2P02655 101 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 ATP1A1P05023 1023 aaKnown RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 PDHA1P08559 390 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 ALPIP09923 528 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 PTPN3P26045 913 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 PAFAH1B1P43034 410 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 NR2C2P49116 596 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 AFF3P51826 1226 aaKnown RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 C21orf59P57076 290 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 EIF3EP60228 445 aaKnown RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 RPS21P63220 83 aaKnown RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 IFI35P80217 286 aaPredicted RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 TUBB2AQ13885 445 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 GRM3Q14832 879 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 NOMO1Q15155 1222 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 KIF19Q2TAC6 998 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 ALG1LQ6GMV1 187 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 NAPEPLDQ6IQ20 393 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 KIAA1161Q6NSJ0 714 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 ERAP2Q6P179 960 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 HDXQ7Z353 690 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 KDELC2Q7Z4H8 507 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 LRRC56Q8IYG6 542 aaPredicted RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 CNTD1Q8N815 330 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 PNPLA1Q8N8W4 532 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 MFSD2AQ8NA29 543 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 LSM14AQ8ND56 463 aaKnown RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 ARRDC2Q8TBH0 407 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 RAB7BQ96AH8 199 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 FEM1CQ96JP0 617 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 PBKQ96KB5 322 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 ZNF641Q96N77 438 aaPredicted RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 QKIQ96PU8 341 aaKnown RBP eCLIP8.81□□□□□ -15e-7■■■■□ 21.5
SH3D19-212ENST00000604440 OSBPL9Q96SU4 736 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 RBM15Q96T37 977 aaKnown RBP eCLIP8.81□□□□□ -1
SH3D19-212ENST00000604440 NAP1L3Q99457 506 aaPredicted RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 IL12RB2Q99665 862 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 TUBB2BQ9BVA1 445 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 TLR10Q9BXR5 811 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 UBP1Q9NZI7 540 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 SNX12Q9UMY4 172 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 ANKRD6Q9Y2G4 727 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 R3HDM2Q9Y2K5 976 aaKnown RBP8.81□□□□□ -1
SH3D19-212ENST00000604440 ATP8A1Q9Y2Q0 1164 aa8.81□□□□□ -1
SH3D19-212ENST00000604440 TRPM6Q9BX84 2022 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 KNTC1P50748 2209 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 NPIPB15A6NHN6 443 aaPredicted RBP8.8□□□□□ -1
SH3D19-212ENST00000604440 EIF4E1BA6NMX2 242 aaKnown RBP8.8□□□□□ -1
SH3D19-212ENST00000604440 C10orf142B7Z368 130 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 PRAMEF26H0Y7S4 382 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 TSPAN6O43657 245 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 AP1G1O43747 822 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 CEP104O60308 925 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 TJP3O95049 919 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 PGLSO95336 258 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 MT-CYBP00156 380 aaPredicted RBP8.8□□□□□ -1
SH3D19-212ENST00000604440 SLC4A1P02730 911 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 MMP2P08253 660 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 C6P13671 934 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 PLA2G2AP14555 144 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 HNRNPA2B1P22626 353 aaKnown RBP8.8□□□□□ -1
SH3D19-212ENST00000604440 RBL1P28749 1068 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 CD38P28907 300 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 AKT2P31751 481 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 CXCR5P32302 372 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 PTPN7P35236 360 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 MMP12P39900 470 aa8.8□□□□□ -1
SH3D19-212ENST00000604440 LIG3P49916 1009 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms