RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 WNT9AO14904 365 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TSPAN6O43657 245 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KERAO60938 352 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 F7P08709 466 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 HLA-EP13747 358 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ENO3P13929 434 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TEAD1P28347 426 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 NTSR1P30989 418 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 RGS4P49798 205 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CDKN1CP49918 316 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 IL2P60568 153 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ABCE1P61221 599 aaKnown RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MLLT1Q03111 559 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ZBTB16Q05516 673 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SFSWAPQ12872 951 aaKnown RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ZNF460Q14592 562 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 STARD3Q14849 445 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SMAD2Q15796 467 aaKnown RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 AAK1Q2M2I8 961 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TTLL9Q3SXZ7 439 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SETMARQ53H47 684 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ZNF776Q68DI1 518 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PTRHD1Q6GMV3 140 aaKnown RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SDE2Q6IQ49 451 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TMEM207Q6UWW9 146 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FAM47EQ6ZV65 393 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 HSD11B1LQ7Z5J1 315 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ISCA2Q86U28 154 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CHPFQ8IZ52 775 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 OR2T3Q8NH03 318 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 STAG3L4Q8TBR4 150 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 L3HYPDHQ96EM0 354 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ASB2Q96Q27 587 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GPR21Q99679 349 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MECRQ9BV79 373 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DRC3Q9H069 523 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KCNK12Q9HB15 430 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SPATS2LQ9NUQ6 558 aaKnown RBP12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KCNK4Q9NYG8 393 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 NCKIPSDQ9NZQ3 722 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 REV3LO60673 3130 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SLCO1B7G3V0H7 640 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SPINT1O43278 529 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 OR1I1O60431 355 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SYNCRIPO60506 623 aaKnown RBP12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SMIM24O75264 130 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DCTN3O75935 186 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 IPO13O94829 963 aaKnown RBP12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TSPAN12O95859 305 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 OR56A5P0C7T3 313 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PRSS56P0CW18 603 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TPBGLP0DKB5 382 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ALOX15P16050 662 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TFEBP19484 476 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KCNA4P22459 653 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MAPK9P45984 424 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SLC1A6P48664 564 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PPARDQ03181 441 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GRSF1Q12849 480 aaKnown RBP eCLIP12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 RCN2Q14257 317 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CST6Q15828 149 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 LEXMQ3ZCV2 418 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ATP13A5Q4VNC0 1218 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 METTL2BQ6P1Q9 378 aaKnown RBP12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PAQR3Q6TCH7 311 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ADAMTSL2Q86TH1 951 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PIM3Q86V86 326 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 WDR75Q8IWA0 830 aaKnown RBP12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SLC44A3Q8N4M1 653 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ZNF366Q8N895 744 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PIWIL2Q8TC59 973 aaKnown RBP12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ANKRD49Q8WVL7 239 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 BTN2A2Q8WVV5 523 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 C10orf82Q8WW14 230 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CNDP1Q96KN2 507 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ATOH8Q96SQ7 321 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SPATA16Q9BXB7 569 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 C1QTNF3Q9BXJ4 246 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ZCCHC2Q9C0B9 1178 aaKnown RBP12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MTG2Q9H4K7 406 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FADS3Q9Y5Q0 445 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PIAS3Q9Y6X2 628 aa12.16□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 F5P12259 2224 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 H3BQ06 376 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 STX16-NPEPL1H3BU86 382 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 STX16O14662 325 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KLK8O60259 260 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DLX3O60479 287 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 NIPSNAP2O75323 286 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GM2AP17900 193 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CHRM3P20309 590 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KCNA5P22460 613 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DGKAP23743 735 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 P2RY2P41231 377 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 LIG3P49916 1009 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CCR3P51677 355 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SATB1Q01826 763 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PRKAA1Q13131 559 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GBX1Q14549 363 aa12.15□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CDKL4Q5MAI5 379 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms