RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 OGFOD2Q6N063 350 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 MSANTD1Q6ZTZ1 278 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 C17orf64Q86WR6 236 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 CNTD1Q8N815 330 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 EXOC2Q96KP1 924 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 NODALQ96S42 347 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ALG2Q9H553 416 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ATG2BQ96BY7 2078 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 AQP4P55087 323 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 USP41Q3LFD5 358 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 VPS26BQ4G0F5 336 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 INO80EQ8NBZ0 244 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 TMCO6Q96DC7 493 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 AIFM2Q9BRQ8 373 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 TNFSF13BQ9Y275 285 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ARHGEF17Q96PE2 2063 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 DDTLA6NHG4 134 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 MATN2O00339 956 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 GRIN3BO60391 1043 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 FGBP02675 491 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 IFNW1P05000 195 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 IFI30P13284 250 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 MC4RP32245 332 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 TAS2R40P59535 323 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 MAXP61244 160 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 TXNL4AP83876 142 aaKnown RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 CREMQ03060 361 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 RHBDF2Q6PJF5 856 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 SERPINA13PQ6UXR4 307 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 SVOPLQ8N434 492 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 GLIS3Q8NEA6 775 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 DNASE1L2Q92874 299 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 TOP1MTQ969P6 601 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 MRPS33Q9Y291 106 aaKnown RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 A0A0G2JPF8 293 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 EME2A4GXA9 379 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 HNRNPCL3B7ZW38 293 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 TULP3O75386 442 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 KDM4BO94953 1096 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 LGALS2P05162 132 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 HNRNPCL4P0DMR1 293 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 SLC5A3P53794 718 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 REP15Q6BDI9 236 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 QSOX2Q6ZRP7 698 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 MARCH7Q9H992 704 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 CPA4Q9UI42 421 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 IKZF2Q9UKS7 526 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ELOVL7A1L3X0 281 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 CYP3A4P08684 503 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 COL6A1P12109 1028 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 UBA1P22314 1058 aaKnown RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ADAM8P78325 824 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 CNTN2Q02246 1040 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 PPP1R26Q5T8A7 1209 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 OR10H4Q8NGA5 316 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 GAL3ST3Q96A11 431 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 APOLD1Q96LR9 279 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF570Q96NI8 536 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 NUP50Q9UKX7 468 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 MAN2B2Q9Y2E5 1009 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ITPKAP23677 461 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ALDH4A1P30038 563 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ECT2LQ008S8 904 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ATP13A4Q4VNC1 1196 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 CLDN25C9JDP6 229 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 RPS9P46781 194 aaKnown RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ACVR2BQ13705 512 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ADNP2Q6IQ32 1131 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 SNX33Q8WV41 574 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 CIDEBQ9UHD4 219 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 TNFRSF11BO00300 401 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ALOX15BO15296 676 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 PSKH1P11801 424 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 PRDX6P30041 224 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 CDKL1Q00532 357 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 LAPTM4BQ86VI4 370 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 CHST4Q8NCG5 386 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 TWIST2Q8WVJ9 160 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ABHD16BQ9H3Z7 469 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 PAK6Q9NQU5 681 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 PLCL2Q9UPR0 1127 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 SPATA31A1Q5TZJ5 1347 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 CARNS1A5YM72 827 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 C1QTNF3-AMACRE9PGA6 284 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 DHX15O43143 795 aaKnown RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 WNT3AP56704 352 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 LIN52Q52LA3 116 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 C17orf50Q8WW18 174 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 EFHD2Q96C19 240 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 CEP295NLQ96MC4 621 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 INTS10Q9NVR2 710 aaKnown RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 ROBO3Q96MS0 1386 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 MAZP56270 477 aaKnown RBP9.54□□□□□ -0.88
CSMD1-217ENST00000602723 PCDH1Q08174 1060 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 USP43Q70EL4 1123 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 SLITRK4Q8IW52 837 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 UBR7Q8N806 425 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 SHC3Q92529 594 aa9.54□□□□□ -0.88
CSMD1-217ENST00000602723 EVA1BQ9NVM1 165 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms