RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 LCA5Q86VQ0 697 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 PHYKPLQ8IUZ5 450 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 TBC1D3Q8IZP1 549 aaPredicted RBP22.37■■□□□ 1.17
IRF3-228ENST00000601291 MDM1Q8TC05 714 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 TCP10LQ8TDR4 215 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 KCNJ9Q92806 393 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 GLYATL1Q969I3 302 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 BOCQ9BWV1 1114 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 C1QTNF7Q9BXJ2 289 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 BTBD1Q9H0C5 482 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 CHRDQ9H2X0 955 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 GPAMQ9HCL2 828 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 ITM2CQ9NQX7 267 aa22.37■■□□□ 1.17
IRF3-228ENST00000601291 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.37■■□□□ 1.17
IRF3-228ENST00000601291 BPTFQ12830 3046 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 IGLV3-16A0A075B6K0 115 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 PRR23AA6NEV1 266 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 E5RI56 91 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 COL6A2P12110 1019 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 CD9P21926 228 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 RPS9P46781 194 aaKnown RBP22.36■■□□□ 1.17
IRF3-228ENST00000601291 ZXDAP98168 799 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 PPARDQ03181 441 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 ZNF460Q14592 562 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 INSCQ1MX18 579 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 MAP7D1Q3KQU3 841 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 ANO7Q6IWH7 933 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 TBC1D1Q86TI0 1168 aaPredicted RBP22.36■■□□□ 1.17
IRF3-228ENST00000601291 HORMAD1Q86X24 394 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 MGARPQ8TDB4 240 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 CLDN23Q96B33 292 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 SGK2Q9HBY8 427 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 INTS9Q9NV88 658 aaKnown RBP22.36■■□□□ 1.17
IRF3-228ENST00000601291 USP36Q9P275 1121 aaKnown RBP22.36■■□□□ 1.17
IRF3-228ENST00000601291 TMPRSS11EQ9UL52 423 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 GRID1Q9ULK0 1009 aa22.36■■□□□ 1.17
IRF3-228ENST00000601291 A0A1W2PQU0 124 aa22.35■■□□□ 1.17
IRF3-228ENST00000601291 MSH3P20585 1137 aa22.35■■□□□ 1.17
IRF3-228ENST00000601291 MPP2Q14168 576 aa22.35■■□□□ 1.17
IRF3-228ENST00000601291 UGT3A1Q6NUS8 523 aa22.35■■□□□ 1.17
IRF3-228ENST00000601291 MACC1Q6ZN28 852 aa22.35■■□□□ 1.17
IRF3-228ENST00000601291 SPEM1Q8N4L4 309 aa22.35■■□□□ 1.17
IRF3-228ENST00000601291 C1QTNF2Q9BXJ5 285 aa22.35■■□□□ 1.17
IRF3-228ENST00000601291 CD320Q9NPF0 282 aa22.35■■□□□ 1.17
IRF3-228ENST00000601291 ZFR2Q9UPR6 939 aaKnown RBP22.35■■□□□ 1.17
IRF3-228ENST00000601291 SIT1Q9Y3P8 196 aa22.35■■□□□ 1.17
IRF3-228ENST00000601291 LRRC72A6NJI9 287 aa22.34■■□□□ 1.17
IRF3-228ENST00000601291 F8W8V4 182 aa22.34■■□□□ 1.17
IRF3-228ENST00000601291 SLC25A14O95258 325 aaPredicted RBP22.34■■□□□ 1.17
IRF3-228ENST00000601291 CHRM3P20309 590 aa22.34■■□□□ 1.17
IRF3-228ENST00000601291 IRF9Q00978 393 aa22.34■■□□□ 1.17
IRF3-228ENST00000601291 LRRC14Q15048 493 aa22.34■■□□□ 1.17
IRF3-228ENST00000601291 TMEM259Q4ZIN3 620 aa22.34■■□□□ 1.17
IRF3-228ENST00000601291 CLEC14AQ86T13 490 aa22.34■■□□□ 1.17
IRF3-228ENST00000601291 HHIPQ96QV1 700 aa22.34■■□□□ 1.17
IRF3-228ENST00000601291 TRMT6Q9UJA5 497 aaKnown RBP22.34■■□□□ 1.17
IRF3-228ENST00000601291 PLLPQ9Y342 182 aa22.34■■□□□ 1.17
IRF3-228ENST00000601291 INPP4BO15327 924 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 NIPSNAP2O75323 286 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 SOD1P00441 154 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 IGLV3-19P01714 112 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 OR56A5P0C7T3 313 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 SLC26A3P40879 764 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 SKIV2L2P42285 1042 aaKnown RBP22.33■■□□□ 1.17
IRF3-228ENST00000601291 KPNA2P52292 529 aaKnown RBP22.33■■□□□ 1.17
IRF3-228ENST00000601291 TSNAXIP1Q2TAA8 658 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 KYAT3Q6YP21 454 aaKnown RBP22.33■■□□□ 1.17
IRF3-228ENST00000601291 CDHR3Q6ZTQ4 885 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 PIM3Q86V86 326 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 CLDN19Q8N6F1 224 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 OR2T34Q8NGX1 318 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 DENND1AQ8TEH3 1009 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 DYDC1Q8WWB3 177 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 CCDC97Q96F63 343 aaPredicted RBP22.33■■□□□ 1.17
IRF3-228ENST00000601291 FAM111AQ96PZ2 611 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 IER2Q9BTL4 223 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 SLC17A9Q9BYT1 436 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 ZCCHC2Q9C0B9 1178 aaKnown RBP22.33■■□□□ 1.17
IRF3-228ENST00000601291 SYTL2Q9HCH5 934 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 C2orf42Q9NWW7 574 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 SLC17A7Q9P2U7 560 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 ADAM21Q9UKJ8 722 aa22.33■■□□□ 1.17
IRF3-228ENST00000601291 QSOX1O00391 747 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 AP2A2O94973 939 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 PCCBP05166 539 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 ATP1B2P14415 290 aaPredicted RBP22.33■■□□□ 1.16
IRF3-228ENST00000601291 MDH1P40925 334 aaKnown RBP22.33■■□□□ 1.16
IRF3-228ENST00000601291 PGGT1BP53609 377 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 B4GALNT1Q00973 533 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 WSCD2Q2TBF2 565 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 HHATQ5VTY9 493 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 PNCKQ6P2M8 343 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 LVRNQ6Q4G3 990 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 PANX3Q96QZ0 392 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 GPR21Q99679 349 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 TSSK1BQ9BXA7 367 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 CD93Q9NPY3 652 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 EBF1Q9UH73 591 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 MED16Q9Y2X0 877 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 OAS3Q9Y6K5 1087 aaKnown RBP22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms