RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 DGKQP52824 942 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 TPTEP56180 551 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 ADARB1P78563 741 aaKnown RBP18.21■□□□□ 0.51
UPF1-210ENST00000600689 DSC2Q02487 901 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 SPESP1Q6UW49 350 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 SCAMP5Q8TAC9 235 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 HASPINQ8TF76 798 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 SIAEQ9HAT2 523 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 TLR9Q9NR96 1032 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 PCDHGA11Q9Y5H2 935 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 SMIM35A0A1B0GVV1 85 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 CLDN25C9JDP6 229 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 HACD2Q6Y1H2 254 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 RAB44Q7Z6P3 723 aaPredicted RBP18.21■□□□□ 0.51
UPF1-210ENST00000600689 TBC1D21Q8IYX1 336 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 RAB2BQ8WUD1 216 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 INTS10Q9NVR2 710 aaKnown RBP18.21■□□□□ 0.51
UPF1-210ENST00000600689 FAM32AQ9Y421 112 aaKnown RBP18.21■□□□□ 0.51
UPF1-210ENST00000600689 AQP9O43315 295 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 ZNF865P0CJ78 1059 aaPredicted RBP18.21■□□□□ 0.51
UPF1-210ENST00000600689 CYP4B1P13584 511 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 VBP1P61758 197 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 UBXN11Q5T124 520 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 KIAA0930Q6ICG6 404 aaPredicted RBP18.21■□□□□ 0.51
UPF1-210ENST00000600689 BLOC1S3Q6QNY0 202 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 ARHGAP12Q8IWW6 846 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 C8orf59Q8N0T1 100 aaPredicted RBP18.21■□□□□ 0.51
UPF1-210ENST00000600689 FCRL5Q96RD9 977 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 GIN1Q9NXP7 522 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 MTRRQ9UBK8 725 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 KLQ9UEF7 1012 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 DERAQ9Y315 318 aa18.21■□□□□ 0.51
UPF1-210ENST00000600689 TCRBV5S2A0A599 114 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 BBIP1A8MTZ0 92 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 AGRPO00253 132 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 MAFKO60675 156 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 FCGR1AP12314 374 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 RBBP7Q16576 425 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 THAP5Q7Z6K1 395 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 NDNFQ8TB73 568 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 ITFG1Q8TB96 612 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 TSPAN17Q96FV3 270 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 SNX5Q9Y5X3 404 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 HS6ST1O60243 411 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 ABCB7O75027 752 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 NADKO95544 446 aaPredicted RBP18.2■□□□□ 0.5
UPF1-210ENST00000600689 CLCN5P51795 746 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 TMBIM6P55061 237 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 ADAM17P78536 824 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 SLC13A2Q13183 592 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 SV2CQ496J9 727 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 PRMT9Q6P2P2 845 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 GALNT5Q7Z7M9 940 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 CILP2Q8IUL8 1156 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 FNDC5Q8NAU1 212 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.2■□□□□ 0.5
UPF1-210ENST00000600689 NTAN1Q96AB6 310 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 UBXN10Q96LJ8 280 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 ENTPD7Q9NQZ7 604 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 SUN2Q9UH99 717 aa18.2■□□□□ 0.5
UPF1-210ENST00000600689 M0R3G1 203 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 SEC14L2O76054 403 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 CD4P01730 458 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 MAP2K4P45985 399 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 RPL34P49207 117 aaKnown RBP18.19■□□□□ 0.5
UPF1-210ENST00000600689 PSEN2P49810 448 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 INAQ16352 499 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 UGT3A1Q6NUS8 523 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 C2orf69Q8N8R5 385 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 TERB1Q8NA31 727 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 OR13J1Q8NGT2 312 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 CNIH3Q8TBE1 160 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 OSCP1Q8WVF1 389 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 NTN4Q9HB63 628 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 ITM2CQ9NQX7 267 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 IPPQ9Y573 584 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 LSM1O15116 133 aaKnown RBP18.19■□□□□ 0.5
UPF1-210ENST00000600689 ALDH2P05091 517 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 CRHBPP24387 322 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 PGFP49763 221 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 SEPHS1P49903 392 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 SERPINH1P50454 418 aaKnown RBP18.19■□□□□ 0.5
UPF1-210ENST00000600689 CTU2Q2VPK5 515 aaKnown RBP18.19■□□□□ 0.5
UPF1-210ENST00000600689 TAF2Q6P1X5 1199 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 ENPP6Q6UWR7 440 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 ZCCHC7Q8N3Z6 543 aaKnown RBP18.19■□□□□ 0.5
UPF1-210ENST00000600689 CDYL2Q8N8U2 506 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 ALOXE3Q9BYJ1 711 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 SEPT3Q9UH03 358 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 ARL5AQ9Y689 179 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 SLC30A1Q9Y6M5 507 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 RALGAPA2Q2PPJ7 1873 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 SYCE1LA8MT33 242 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 J3KR12 359 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 E2F6O75461 281 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 MYO1DO94832 1006 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 CYBBP04839 570 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 PCYT1AP49585 367 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 MAP2K5Q13163 448 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 DAG1Q14118 895 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms