RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	FBF1	Q8TES7	1133 aa		21.76	■■□□□ 1.07
LTBP4-227	ENST00000600026	SGSM3	Q96HU1	749 aa		21.76	■■□□□ 1.07
LTBP4-227	ENST00000600026	CATSPERZ	Q9NTU4	200 aa		21.76	■■□□□ 1.07
LTBP4-227	ENST00000600026	MOCS1	Q9NZB8	636 aa		21.76	■■□□□ 1.07
LTBP4-227	ENST00000600026	PRAMEF1	O95521	474 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	CER1	O95813	267 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	HTR1B	P28222	390 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	HSD17B3	P37058	310 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	SLC29A2	Q14542	456 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	CHRNA6	Q15825	494 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	ZNF423	Q2M1K9	1284 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	HLA-B	Q31612	363 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	PRAMEF14	Q5SWL7	426 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	BEND6	Q5SZJ8	279 aa	Predicted RBP	21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	MRNIP	Q6NTE8	343 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	NEPRO	Q6NW34	567 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	TRMT10B	Q6PF06	316 aa	Known RBP	21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	SNX20	Q7Z614	316 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	TRIM74	Q86UV6	250 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	PARG	Q86W56	976 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	MINDY1	Q8N5J2	469 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	ZNF398	Q8TD17	642 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	COX14	Q96I36	57 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	WDR92	Q96MX6	357 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	CCDC77	Q9BR77	488 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	GAREM1	Q9H706	876 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	ASB8	Q9H765	288 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	ERVMER34-1	Q9H9K5	563 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	IL21R	Q9HBE5	538 aa		21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	CNOT6	Q9ULM6	557 aa	Known RBP	21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	TDRD6	O60522	2096 aa	Known RBP	21.75	■■□□□ 1.07
LTBP4-227	ENST00000600026	TMEM202	A6NGA9	273 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	OR51F1	A6NGY5	319 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	CD3EAP	O15446	510 aa	Known RBP	21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	GPR39	O43194	453 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	ERVK-10	P10266	1014 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	ARNT	P27540	789 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	PPARG	P37231	505 aa	Predicted RBP	21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	ID4	P47928	161 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	ATXN3	P54252	364 aa	Predicted RBP	21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	EIF2B5	Q13144	721 aa	Known RBP	21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	GPR33	Q49SQ1	333 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	ATP13A5	Q4VNC0	1218 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	HSP90AA5P	Q58FG0	334 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	AARS2	Q5JTZ9	985 aa	Known RBP	21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	MICALCL	Q6ZW33	695 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	TAS2R42	Q7RTR8	314 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	UNC5B	Q8IZJ1	945 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	OXR1	Q8N573	874 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	UHMK1	Q8TAS1	419 aa	Known RBP	21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	ULK4	Q96C45	1275 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	HIC2	Q96JB3	615 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	CYTH2	Q99418	400 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	ELF4	Q99607	663 aa	Predicted RBP	21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	TTC1	Q99614	292 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	FUT8	Q9BYC5	575 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	IARS2	Q9NSE4	1012 aa	Known RBP	21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	NSMCE4A	Q9NXX6	385 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	IL1RAPL1	Q9NZN1	696 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	ZFAT	Q9P243	1243 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	CRLS1	Q9UJA2	301 aa		21.74	■■□□□ 1.07
LTBP4-227	ENST00000600026	GOLGA8K	D6RF30	607 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	GOLGA8T	H3BQL2	631 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	PFDN6	O15212	129 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	KEL	P23276	732 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	FOXN2	P32314	431 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	NFATC2	Q13469	925 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	NAB1	Q13506	487 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	SMAD1	Q15797	465 aa	Known RBP	21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	UAP1	Q16222	522 aa	Predicted RBP	21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	KLHL38	Q2WGJ6	581 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	UBAP2	Q5T6F2	1119 aa	Known RBP	21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	FBXO38	Q6PIJ6	1188 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	ENPP7	Q6UWV6	458 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	ERMP1	Q7Z2K6	904 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	GPR150	Q8NGU9	434 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	GLYATL1	Q969I3	302 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	VPS35	Q96QK1	796 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	ACSS3	Q9H6R3	686 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	CAAP1	Q9H8G2	361 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	FGF22	Q9HCT0	170 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	RABGEF1	Q9UJ41	708 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	TMPRSS11E	Q9UL52	423 aa		21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	PNMA8B	Q9ULN7	279 aa	Predicted RBP	21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026	OAS3	Q9Y6K5	1087 aa	Known RBP	21.73	■■□□□ 1.07
LTBP4-227	ENST00000600026		A0A1B0GTQ1	180 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	FAM159B	A6NKW6	160 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	CDX4	O14627	284 aa	Predicted RBP	21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	GDF9	O60383	454 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	OGN	P20774	298 aa	Known RBP	21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	PML	P29590	882 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	CA5A	P35218	305 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	SHB	Q15464	509 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	ZNF542P	Q5EBM4	170 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	LYPLAL1	Q5VWZ2	237 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	KCTD16	Q68DU8	428 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	DOK6	Q6PKX4	331 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	CTAGE3P	Q8IX95	158 aa		21.72	■■□□□ 1.07
LTBP4-227	ENST00000600026	KIAA2013	Q8IYS2	634 aa		21.72	■■□□□ 1.07

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms