RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 TMEM115Q12893 351 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-206ENST00000599699 SPIDRQ14159 915 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 PLA2G4EQ3MJ16 856 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 LRRTM4Q86VH4 590 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 CACTIN-AS1Q8N1I8 211 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 RASGEF1CQ8N431 466 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 PRELID2Q8N945 189 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 OR52K1Q8NGK4 314 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 WDR48Q8TAF3 677 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 NAP1L3Q99457 506 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-206ENST00000599699 ASXL3Q9C0F0 2248 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 PLXNB3Q9ULL4 1909 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 TRBV23OR9-2A0A075B6M9 112 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 KMOO15229 486 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 LDB2O43679 373 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 NUDT21O43809 227 aaKnown RBP27.83■■■□□ 2.05
SSBP4-206ENST00000599699 SNX2O60749 519 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 CSO75390 466 aaKnown RBP27.83■■■□□ 2.05
SSBP4-206ENST00000599699 SRP72O76094 671 aaKnown RBP27.83■■■□□ 2.05
SSBP4-206ENST00000599699 RPLP0P05388 317 aaKnown RBP27.83■■■□□ 2.05
SSBP4-206ENST00000599699 APRTP07741 180 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 CDH17Q12864 832 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 CAMK2BQ13554 666 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 SEMA5AQ13591 1074 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 INSCQ1MX18 579 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 GPRC6AQ5T6X5 926 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 RBM44Q6ZP01 1051 aaKnown RBP27.83■■■□□ 2.05
SSBP4-206ENST00000599699 TRAPPC5Q8IUR0 188 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 NAGSQ8N159 534 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 ARL14Q8N4G2 192 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 OSBPL9Q96SU4 736 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 AP1M1Q9BXS5 423 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 OSGEPL1Q9H4B0 414 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 ASB8Q9H765 288 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 KLC4Q9NSK0 619 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 PYCARDQ9ULZ3 195 aa27.83■■■□□ 2.05
SSBP4-206ENST00000599699 KNTC1P50748 2209 aa27.82■■■□□ 2.04
SSBP4-206ENST00000599699 TMEM8BA6NDV4 472 aa27.82■■■□□ 2.04
SSBP4-206ENST00000599699 PGRMC1O00264 195 aaKnown RBP27.82■■■□□ 2.04
SSBP4-206ENST00000599699 CHUKO15111 745 aa27.82■■■□□ 2.04
SSBP4-206ENST00000599699 AKT1P31749 480 aa27.82■■■□□ 2.04
SSBP4-206ENST00000599699 CCL7P80098 99 aa27.82■■■□□ 2.04
SSBP4-206ENST00000599699 C4orf22Q6V702 233 aa27.82■■■□□ 2.04
SSBP4-206ENST00000599699 CCNJLQ8IV13 435 aa27.82■■■□□ 2.04
SSBP4-206ENST00000599699 DDHD1Q8NEL9 900 aa27.82■■■□□ 2.04
SSBP4-206ENST00000599699 ZCCHC14Q8WYQ9 949 aaKnown RBP27.82■■■□□ 2.04
SSBP4-206ENST00000599699 DNAJC1Q96KC8 554 aaKnown RBP27.82■■■□□ 2.04
SSBP4-206ENST00000599699 GFM1Q96RP9 751 aaKnown RBP27.82■■■□□ 2.04
SSBP4-206ENST00000599699 CCDC86Q9H6F5 360 aaKnown RBP27.82■■■□□ 2.04
SSBP4-206ENST00000599699 TBC1D29Q9UFV1 150 aa27.82■■■□□ 2.04
SSBP4-206ENST00000599699 CCL22O00626 93 aa27.81■■■□□ 2.04
SSBP4-206ENST00000599699 CASC3O15234 703 aaKnown RBP27.81■■■□□ 2.04
SSBP4-206ENST00000599699 TCEA3O75764 348 aa27.81■■■□□ 2.04
SSBP4-206ENST00000599699 SUN1O94901 812 aa27.81■■■□□ 2.04
SSBP4-206ENST00000599699 PNLIPP16233 465 aa27.81■■■□□ 2.04
SSBP4-206ENST00000599699 MSH3P20585 1137 aa27.81■■■□□ 2.04
SSBP4-206ENST00000599699 BASP1P80723 227 aaKnown RBP27.81■■■□□ 2.04
SSBP4-206ENST00000599699 C17orf82Q86X59 251 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-206ENST00000599699 COG1Q8WTW3 980 aa27.81■■■□□ 2.04
SSBP4-206ENST00000599699 MAGOHBQ96A72 148 aaKnown RBP27.81■■■□□ 2.04
SSBP4-206ENST00000599699 SMOXQ9NWM0 555 aa27.81■■■□□ 2.04
SSBP4-206ENST00000599699 CRLS1Q9UJA2 301 aa27.81■■■□□ 2.04
SSBP4-206ENST00000599699 DNAJC16Q9Y2G8 782 aa27.81■■■□□ 2.04
SSBP4-206ENST00000599699 SLC30A1Q9Y6M5 507 aa27.81■■■□□ 2.04
SSBP4-206ENST00000599699 ZNF7P17097 686 aaPredicted RBP27.8■■■□□ 2.04
SSBP4-206ENST00000599699 ITGALP20701 1170 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 CA5AP35218 305 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 NFATC2Q13469 925 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 ST3GAL2Q16842 350 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 NXPE2Q96DL1 559 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 LRRN3Q9H3W5 708 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 SMARCAL1Q9NZC9 954 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 SLC23A2Q9UGH3 650 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 TTC7AQ9ULT0 858 aaPredicted RBP27.8■■■□□ 2.04
SSBP4-206ENST00000599699 SNX12Q9UMY4 172 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 PCDHB1Q9Y5F3 818 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 AK5Q9Y6K8 562 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 ARHGEF17Q96PE2 2063 aaPredicted RBP27.8■■■□□ 2.04
SSBP4-206ENST00000599699 RP1P56715 2156 aa27.8■■■□□ 2.04
SSBP4-206ENST00000599699 IGF2RP11717 2491 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 CCDC78A2IDD5 438 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 EML2O95834 649 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 ALDH4A1P30038 563 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 GRIA1P42261 906 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 GNG11P61952 73 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 XIAPP98170 497 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 CCDC173Q0VFZ6 552 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 TRIP13Q15645 432 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-206ENST00000599699 CCDC38Q502W7 563 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 SPRED1Q7Z699 444 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 RASGEF1AQ8N9B8 481 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 MDM1Q8TC05 714 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 C19orf43Q9BQ61 176 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 TIMM29Q9BSF4 260 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 FAM96AQ9H5X1 160 aa27.79■■■□□ 2.04
SSBP4-206ENST00000599699 NLE1Q9NVX2 485 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-206ENST00000599699 NTN3O00634 580 aaPredicted RBP27.78■■■□□ 2.04
SSBP4-206ENST00000599699 ZW10O43264 779 aa27.78■■■□□ 2.04
SSBP4-206ENST00000599699 SLC2A4P14672 509 aa27.78■■■□□ 2.04
SSBP4-206ENST00000599699 VCLP18206 1134 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms