RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 NRDCO43847 1150 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 DXOO77932 396 aaKnown RBP22.32■■□□□ 1.16
CCDC9-204ENST00000599398 CDK14O94921 469 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 EML2O95834 649 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 ADRA1AP35348 466 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 PPM1FP49593 454 aaPredicted RBP22.32■■□□□ 1.16
CCDC9-204ENST00000599398 GTF2H3Q13889 308 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 CHRNA6Q15825 494 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 INSCQ1MX18 579 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 COL28A1Q2UY09 1125 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 RANBP10Q6VN20 620 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 USP53Q70EK8 1073 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 LIN37Q96GY3 246 aaPredicted RBP22.32■■□□□ 1.16
CCDC9-204ENST00000599398 TTC25Q96NG3 672 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 ALS2CR12Q96Q35 445 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 TBL1YQ9BQ87 522 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 TMEM121Q9BTD3 319 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 RDH14Q9HBH5 336 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 THSD1Q9NS62 852 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 KLC4Q9NSK0 619 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 TMPRSS11EQ9UL52 423 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 PCDHGA8Q9Y5G5 932 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 ARL5AQ9Y689 179 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 C2orf81A6NN90 581 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 VEGFDO43915 354 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 PPFIA2O75334 1257 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 GPR3P46089 330 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 PCBP4P57723 403 aaKnown RBP22.31■■□□□ 1.16
CCDC9-204ENST00000599398 ERVPABLB-1P60509 514 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 CCDC173Q0VFZ6 552 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 SPARCL1Q14515 664 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 PTPRCAPQ14761 206 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 NR1D2Q14995 579 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 RPS6KA1Q15418 735 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 KHDC1Q4VXA5 237 aaKnown RBP22.31■■□□□ 1.16
CCDC9-204ENST00000599398 PHF19Q5T6S3 580 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 RAB11FIP2Q7L804 512 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 PIM3Q86V86 326 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 LRRTM4Q86VH4 590 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 SFRP1Q8N474 314 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 FBXO39Q8N4B4 442 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 SLC35B2Q8TB61 432 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 ATG4AQ8WYN0 398 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 NAF1Q96HR8 494 aaKnown RBP22.31■■□□□ 1.16
CCDC9-204ENST00000599398 ZMYND15Q9H091 742 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 ASCL3Q9NQ33 180 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 KCNK4Q9NYG8 393 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 RALYQ9UKM9 306 aaKnown RBP22.31■■□□□ 1.16
CCDC9-204ENST00000599398 ZFYVE26Q68DK2 2539 aa22.31■■□□□ 1.16
CCDC9-204ENST00000599398 ZFHX4Q86UP3 3567 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 PLD2O14939 933 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 CHUKO15111 745 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 KMOO15229 486 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 GPR39O43194 453 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 UGT1A9O60656 530 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 TNFSF15O95150 251 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 CPNE6O95741 557 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 SLC2A4P14672 509 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 UGT1A6P19224 532 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 LPOP22079 712 aaPredicted RBP22.3■■□□□ 1.16
CCDC9-204ENST00000599398 UGT1A1P22309 533 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 UGT1A4P22310 534 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 CCKBRP32239 447 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 UGT1A3P35503 534 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 UGT1A5P35504 534 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 ABCG1P45844 678 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 GDF10P55107 478 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 TMEM115Q12893 351 aaPredicted RBP22.3■■□□□ 1.16
CCDC9-204ENST00000599398 EIF3IQ13347 325 aaKnown RBP22.3■■□□□ 1.16
CCDC9-204ENST00000599398 TAF1AQ15573 450 aaPredicted RBP22.3■■□□□ 1.16
CCDC9-204ENST00000599398 PARP6Q2NL67 630 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 TMPRSS9Q7Z410 1059 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 ZNF761Q86XN6 746 aaPredicted RBP22.3■■□□□ 1.16
CCDC9-204ENST00000599398 UBE2Q2Q8WVN8 375 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 SLC46A1Q96NT5 459 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 SLC38A3Q99624 504 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 STN1Q9H668 368 aaKnown RBP22.3■■□□□ 1.16
CCDC9-204ENST00000599398 UGT1A7Q9HAW7 530 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 UGT1A10Q9HAW8 530 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 UGT1A8Q9HAW9 530 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 DNAJC16Q9Y2G8 782 aa22.3■■□□□ 1.16
CCDC9-204ENST00000599398 ZNF7P17097 686 aaPredicted RBP22.29■■□□□ 1.16
CCDC9-204ENST00000599398 ITPKBP27987 946 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 FASLGP48023 281 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 HHEXQ03014 270 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 NFATC2Q13469 925 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 ITGA9Q13797 1035 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 MEI1Q5TIA1 1274 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 NKAIN2Q5VXU1 208 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 IYDQ6PHW0 289 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 IGF2-ASQ6U949 168 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 TRAPPC5Q8IUR0 188 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 TAB3Q8N5C8 712 aaPredicted RBP22.29■■□□□ 1.16
CCDC9-204ENST00000599398 ZNF248Q8NDW4 579 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 OR4K2Q8NGD2 314 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 DTX3LQ8TDB6 740 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 BRSK1Q8TDC3 778 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 PRR11Q96HE9 360 aaPredicted RBP22.29■■□□□ 1.16
CCDC9-204ENST00000599398 NUDT22Q9BRQ3 303 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 ZCCHC2Q9C0B9 1178 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms