RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 C1QTNF1Q9BXJ1 281 aa15.31■□□□□ 0.04
UPF1-206ENST00000598471 IQCGQ9H095 443 aaKnown RBP15.31■□□□□ 0.04
UPF1-206ENST00000598471 C2orf42Q9NWW7 574 aa15.31■□□□□ 0.04
UPF1-206ENST00000598471 EBF1Q9UH73 591 aa15.31■□□□□ 0.04
UPF1-206ENST00000598471 VWA7Q9Y334 891 aa15.31■□□□□ 0.04
UPF1-206ENST00000598471 IGLV3-16A0A075B6K0 115 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 FADS2P1A8MWK0 482 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 E5RI56 91 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 COPEO14579 308 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 OR1I1O60431 355 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 VPS26AO75436 327 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 SLC25A14O95258 325 aaPredicted RBP15.3■□□□□ 0.04
UPF1-206ENST00000598471 PCCBP05166 539 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 OR56A5P0C7T3 313 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 PYGBP11216 843 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 AOC1P19801 751 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 CD6P30203 668 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 ACSL1P33121 698 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 CCNFP41002 786 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 MAGEA12P43365 314 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 PPP2R2AP63151 447 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 WSCD2Q2TBF2 565 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 TMEM31Q5JXX7 168 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 RBM20Q5T481 1227 aaKnown RBP15.3■□□□□ 0.04
UPF1-206ENST00000598471 CWF19L1Q69YN2 538 aaKnown RBP15.3■□□□□ 0.04
UPF1-206ENST00000598471 UGT3A1Q6NUS8 523 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 ADAMTSL4Q6UY14 1074 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 MAMSTRQ6ZN01 415 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 C4orf33Q8N1A6 199 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 PNPLA1Q8N8W4 532 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 DENND6BQ8NEG7 585 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 SELENOSQ9BQE4 189 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 TSSK1BQ9BXA7 367 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 TPSD1Q9BZJ3 242 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 P2RY12Q9H244 342 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 CNOT10Q9H9A5 744 aaKnown RBP15.3■□□□□ 0.04
UPF1-206ENST00000598471 POPDC3Q9HBV1 291 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 KCNK9Q9NPC2 374 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 PCMTD2Q9NV79 361 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 TAS2R13Q9NYV9 303 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 OGFRQ9NZT2 677 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 ANKRD6Q9Y2G4 727 aa15.3■□□□□ 0.04
UPF1-206ENST00000598471 A0A087X1B8 175 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 A0A096LPK6 155 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 FOXO6A8MYZ6 492 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 GOLGA8RI6L899 631 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 INPP4BO15327 924 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 AP2A2O94973 939 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 PAK4O96013 591 aaPredicted RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 CD9P21926 228 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 FDXRP22570 491 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 MAT2AP31153 395 aaKnown RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 NUDT1P36639 197 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 CCT5P48643 541 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 CCR5P51681 352 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 TAS2R39P59534 338 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 PPP2CBP62714 309 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 PPP2CAP67775 309 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 SLC18A2Q05940 514 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 PDAP1Q13442 181 aaKnown RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 GTF2H3Q13889 308 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 ZKSCAN8Q15776 578 aaPredicted RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 SEPT7Q16181 437 aaKnown RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 PNCKQ6P2M8 343 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 ZNF549Q6P9A3 640 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 MACC1Q6ZN28 852 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 CMC1Q7Z7K0 106 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 LCA5Q86VQ0 697 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 TP53I13Q8NBR0 393 aaPredicted RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 KCNJ9Q92806 393 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 TOE1Q96GM8 510 aaKnown RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 APOPT1Q96IL0 206 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 HIC2Q96JB3 615 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 SPACA7Q96KW9 195 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 PANX3Q96QZ0 392 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 KLF6Q99612 283 aaPredicted RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 BOCQ9BWV1 1114 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 VPS11Q9H270 941 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 CAB39LQ9H9S4 337 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 CD93Q9NPY3 652 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 SPATA6Q9NWH7 488 aaPredicted RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 MKS1Q9NXB0 559 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 NKIRAS1Q9NYS0 192 aa15.29■□□□□ 0.04
UPF1-206ENST00000598471 WSB2Q9NYS7 404 aaPredicted RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 TRMT6Q9UJA5 497 aaKnown RBP15.29■□□□□ 0.04
UPF1-206ENST00000598471 PRR33A8MZF0 331 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 PRPF4O43172 522 aaKnown RBP eCLIP15.28■□□□□ 0.04
UPF1-206ENST00000598471 NDUFS2O75306 463 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 GLRA3O75311 464 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 SOD1P00441 154 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 C2P06681 752 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 COL6A2P12110 1019 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 ATP1B2P14415 290 aaPredicted RBP15.28■□□□□ 0.04
UPF1-206ENST00000598471 CHRM3P20309 590 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 SKIV2L2P42285 1042 aaKnown RBP15.28■□□□□ 0.04
UPF1-206ENST00000598471 KPNA2P52292 529 aaKnown RBP15.28■□□□□ 0.04
UPF1-206ENST00000598471 IRF4Q15306 451 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 CTSL3PQ5NE16 218 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 KIAA0895LQ68EN5 471 aa15.28■□□□□ 0.04
UPF1-206ENST00000598471 TBC1D1Q86TI0 1168 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms