RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SDHDO14521 159 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 ARSAP15289 507 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 LHCGRP22888 699 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 ATP6V0D1P61421 351 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 BTKQ06187 659 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 GALNT1Q10472 559 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 NAA25Q14CX7 972 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 FBXO48Q5FWF7 155 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 LRRC66Q68CR7 880 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 CERS6Q6ZMG9 384 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 RFLNAQ6ZTI6 216 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 TPRG1Q6ZUI0 275 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 ACAD11Q709F0 780 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 SNX20Q7Z614 316 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 NKAPQ8N5F7 415 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 GPR26Q8NDV2 337 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 MCUR1Q96AQ8 359 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 OTUB2Q96DC9 234 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 LINGO1Q96FE5 620 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 MAELQ96JY0 434 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 NSUN5Q96P11 429 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 ERVW-1Q9UQF0 538 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 PPIL1Q9Y3C6 166 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 PRSS21Q9Y6M0 314 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 TRBV5-4A0A0C4DH59 114 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 GLYATL1P3A0A0U1RQE8 302 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 LOC100653049A0A140TA62 436 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 SUPT3HB4E1H0 165 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 E5RI56 91 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 SUPT3HO75486 399 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 KRT34O76011 436 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 POU2F2P09086 479 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 PGM1P36871 562 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 VIPR2P41587 438 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 PTSQ03393 145 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 DMC1Q14565 340 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 DHCR24Q15392 516 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 NXNQ6DKJ4 435 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 CLEC6AQ6EIG7 209 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 STON2Q8WXE9 905 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 MARK4Q96L34 752 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 MRGPRX3Q96LB0 322 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 MCCC1Q96RQ3 725 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 C19orf43Q9BQ61 176 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 CCDC28BQ9BUN5 200 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 ZNF385DQ9H6B1 395 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 APPL1Q9UKG1 709 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 COMMD10Q9Y6G5 202 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 TTC34A8MYJ7 566 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 CYP17A1P05093 508 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 GFAPP14136 432 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 ITGALP20701 1170 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 SPAM1P38567 509 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 IL2P60568 153 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 COL19A1Q14993 1142 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 CBARPQ8N350 705 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 CLDN19Q8N6F1 224 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 CELF5Q8N6W0 485 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 ST13P5Q8NFI4 369 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 LKAAEAR1Q8TD35 194 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 FRS2Q8WU20 508 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 ASIC4Q96FT7 647 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 CATSPER2Q96P56 530 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 TRMOQ9BU70 441 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 MTG2Q9H4K7 406 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 DZANK1Q9NVP4 752 aa16.88■□□□□ 0.29
SHKBP1-216ENST00000598201 TRPC5OSA6NMA1 111 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 ENTPD5O75356 428 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 POLR2EP19388 210 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 ACRV1P26436 265 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 COPAP53621 1224 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 SH3BP2P78314 561 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 MXRA7P84157 204 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 SLC25A3Q00325 362 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 SKIV2LQ15477 1246 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 GRAMD4Q6IC98 578 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 USP45Q70EL2 814 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 C12orf40Q86WS4 652 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 AHI1Q8N157 1196 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 CLPTM1LQ96KA5 538 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 ZNF641Q96N77 438 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 KLHL32Q96NJ5 620 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 LENG8Q96PV6 779 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 CLPBQ9H078 707 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 C1orf21Q9H246 121 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 BRD9Q9H8M2 597 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 ZMYM5Q9UJ78 669 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 FBXO10Q9UK96 956 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 DHRS7Q9Y394 339 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 TRAF6Q9Y4K3 522 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 PCDHB1Q9Y5F3 818 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 ZNF106Q9H2Y7 1883 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 NCF1BA6NI72 391 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 NCF1CA8MVU1 366 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 WFS1O76024 890 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 CDK14O94921 469 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 COX4I1P13073 169 aa16.87■□□□□ 0.29
SHKBP1-216ENST00000598201 NCF1P14598 390 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms