RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ETV5P41161 510 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 TNNT3P45378 269 aaPredicted RBP17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 VAV2P52735 878 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 RHDQ02161 417 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 HHEXQ03014 270 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 CFHR1Q03591 330 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 SIRPB2Q5JXA9 342 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 NKAIN2Q5VXU1 208 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 TMEM71Q6P5X7 295 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 INO80CQ6PI98 192 aaPredicted RBP17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 RAD9BQ6WBX8 426 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 SLC9B2Q86UD5 537 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 TTC30BQ8N4P2 665 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 WBP1Q96G27 269 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 OXNAD1Q96HP4 312 aaPredicted RBP17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 SLC38A3Q99624 504 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 FERMT1Q9BQL6 677 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 DUSP10Q9Y6W6 482 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 BPTFQ12830 3046 aa17.71■□□□□ 0.43
CHMP2A-203ENST00000597209 TRBV23OR9-2A0A075B6M9 112 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 PRR19A6NJB7 356 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 EIF4E1BA6NMX2 242 aaKnown RBP17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 ERVH48-1M5A8F1 160 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 KMOO15229 486 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 SLC4A1P02730 911 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 THRAP10827 490 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 LIPCP11150 499 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 RBL1P28749 1068 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 EPHA4P54764 986 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 RWDD2BP57060 319 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 SLC1A5Q15758 541 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 ZNF648Q5T619 568 aaPredicted RBP17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 ARHGAP40Q5TG30 622 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 TMEM164Q5U3C3 297 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 LRRTM4Q86VH4 590 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 OR10G6Q8NH81 332 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 BRSK1Q8TDC3 778 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 USP7Q93009 1102 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 CCDC74BQ96LY2 380 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 CCNL2Q96S94 520 aaPredicted RBP17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 TIMM29Q9BSF4 260 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 OSBPL8Q9BZF1 889 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 LACRTQ9GZZ8 138 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 ARFGAP3Q9NP61 516 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 IL17CQ9P0M4 197 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 RSPH14Q9UHP6 348 aa17.7■□□□□ 0.42
CHMP2A-203ENST00000597209 PRAMEF33A0A0G2JMD5 474 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 C9orf172C9J069 976 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 H7C0C1 242 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 DUX1O43812 170 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 PRAMEF10O60809 474 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 PPFIA2O75334 1257 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 ZNF189O75820 626 aaPredicted RBP17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 ANXA9O76027 345 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 ZNF7P17097 686 aaPredicted RBP17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 XRCC1P18887 633 aaPredicted RBP17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 CSF2RBP32927 897 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 CETN2P41208 172 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 ATP5OP48047 213 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 MAPK10P53779 464 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 GEMP55040 296 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 NAP1L1P55209 391 aaKnown RBP17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 ATP13A5Q4VNC0 1218 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 CCDC181Q5TID7 509 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 ITPRIPL1Q6GPH6 555 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 WDR74Q6RFH5 385 aaPredicted RBP17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 CCDC81Q6ZN84 652 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 GAS2L3Q86XJ1 694 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 LRRC57Q8N9N7 239 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 AGBL5Q8NDL9 886 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 ACTL9Q8TC94 416 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 SLC39A7Q92504 469 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 AHCYL2Q96HN2 611 aaKnown RBP17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 GBA3Q9H227 469 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 EPB41L1Q9H4G0 881 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 UCK1Q9HA47 277 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 BPIFA1Q9NP55 256 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 IL26Q9NPH9 171 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 KLC4Q9NSK0 619 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 TMPRSS11EQ9UL52 423 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 PCDHGA3Q9Y5H0 932 aa17.69■□□□□ 0.42
CHMP2A-203ENST00000597209 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 SNX2O60749 519 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 KCNJ13O60928 360 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 CDK14O94921 469 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 CCL4P13236 92 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 SPAM1P38567 509 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 CHRNA4P43681 627 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 UBE2IP63279 158 aaKnown RBP17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 OTUD4Q01804 1114 aaKnown RBP17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 COL9A2Q14055 689 aaPredicted RBP17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 DTX1Q86Y01 620 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 CDKL3Q8IVW4 592 aaPredicted RBP17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 TXLNBQ8N3L3 684 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 SLC25A41Q8N5S1 370 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 RCBTB1Q8NDN9 531 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 ACRBPQ8NEB7 543 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 IPMKQ8NFU5 416 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 TAAR9Q96RI9 348 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms