RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 RUBCNQ92622 972 aa15.35■□□□□ 0.05
SMCO4-206ENST00000596676 WDR92Q96MX6 357 aa15.35■□□□□ 0.05
SMCO4-206ENST00000596676 VPS35Q96QK1 796 aa15.35■□□□□ 0.05
SMCO4-206ENST00000596676 NUSAP1Q9BXS6 441 aaKnown RBP15.35■□□□□ 0.05
SMCO4-206ENST00000596676 CYP4F12Q9HCS2 524 aa15.35■□□□□ 0.05
SMCO4-206ENST00000596676 CATSPERZQ9NTU4 200 aa15.35■□□□□ 0.05
SMCO4-206ENST00000596676 C20orf96Q9NUD7 363 aaPredicted RBP15.35■□□□□ 0.05
SMCO4-206ENST00000596676 DNAJC28Q9NX36 388 aa15.35■□□□□ 0.05
SMCO4-206ENST00000596676 KLQ9UEF7 1012 aa15.35■□□□□ 0.05
SMCO4-206ENST00000596676 LRP4O75096 1905 aa15.35■□□□□ 0.05
SMCO4-206ENST00000596676 PRSS38A1L453 326 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 EIF3HO15372 352 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMCO4-206ENST00000596676 SDC3O75056 442 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 DPP6P42658 865 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 SRP54P61011 504 aaKnown RBP15.34■□□□□ 0.05
SMCO4-206ENST00000596676 VSNL1P62760 191 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 OVGP1Q12889 678 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 TMEM115Q12893 351 aaPredicted RBP15.34■□□□□ 0.05
SMCO4-206ENST00000596676 LONRF1Q17RB8 773 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 ZNF789Q5FWF6 425 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 PDPK2PQ6A1A2 396 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 DCP2Q8IU60 420 aaKnown RBP15.34■□□□□ 0.05
SMCO4-206ENST00000596676 PHYKPLQ8IUZ5 450 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 DENND6AQ8IWF6 608 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 DDHD1Q8NEL9 900 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 CCL4L1Q8NHW4 92 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 DTX3LQ8TDB6 740 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 PYROXD1Q8WU10 500 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 PEX13Q92968 403 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 LRRC39Q96DD0 335 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 FMO2Q99518 471 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 C19orf43Q9BQ61 176 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 GAREM1Q9H706 876 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 TRIM39Q9HCM9 518 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 IARS2Q9NSE4 1012 aaKnown RBP15.34■□□□□ 0.05
SMCO4-206ENST00000596676 SUFUQ9UMX1 484 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 SLC17A4Q9Y2C5 497 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 ST14Q9Y5Y6 855 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 PRSS21Q9Y6M0 314 aa15.34■□□□□ 0.05
SMCO4-206ENST00000596676 CDX4O14627 284 aaPredicted RBP15.33■□□□□ 0.04
SMCO4-206ENST00000596676 TOR1BO14657 336 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 SGTAO43765 313 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 DNAJC6O75061 913 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 PYGLP06737 847 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 ACRV1P26436 265 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 AKT1P31749 480 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 GNPDA1P46926 289 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 CTSCP53634 463 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 CTBP1Q13363 440 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 CUL1Q13616 776 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 PTK2BQ14289 1009 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 CSRP2Q16527 193 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 KYNUQ16719 465 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 ZNF423Q2M1K9 1284 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 PLA2G4EQ3MJ16 856 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 GPR33Q49SQ1 333 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 FASTKD1Q53R41 847 aaKnown RBP15.33■□□□□ 0.04
SMCO4-206ENST00000596676 HSP90AA5PQ58FG0 334 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 SPANXN3Q5MJ09 141 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 NEPROQ6NW34 567 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 CRTC3Q6UUV7 619 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 CCNI2Q6ZMN8 369 aaPredicted RBP15.33■□□□□ 0.04
SMCO4-206ENST00000596676 RABEPKQ7Z6M1 372 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 PHACTR4Q8IZ21 702 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 MINDY1Q8N5J2 469 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 CLDN19Q8N6F1 224 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 OTUD6BQ8N6M0 293 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 FAM174AQ8TBP5 190 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 UBXN4Q92575 508 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 SGF29Q96ES7 293 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 ELF4Q99607 663 aaPredicted RBP15.33■□□□□ 0.04
SMCO4-206ENST00000596676 TMEM168Q9H0V1 697 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 CARS2Q9HA77 564 aaKnown RBP15.33■□□□□ 0.04
SMCO4-206ENST00000596676 LRRC4CQ9HCJ2 640 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 SMYD2Q9NRG4 433 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 SMOXQ9NWM0 555 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 UCKL1Q9NWZ5 548 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 ZDHHC3Q9NYG2 299 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 NINJ2Q9NZG7 142 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 MTRF1LQ9UGC7 380 aaKnown RBP15.33■□□□□ 0.04
SMCO4-206ENST00000596676 SLC23A2Q9UGH3 650 aa15.33■□□□□ 0.04
SMCO4-206ENST00000596676 OR2AG2A6NM03 316 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 CXorf49A8MYA2 514 aaPredicted RBP15.32■□□□□ 0.04
SMCO4-206ENST00000596676 MAGEC1O60732 1142 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 CDK14O94921 469 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 RASGRP1O95267 797 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 CSF2P04141 144 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 JUNDP17535 347 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 PAMP19021 973 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 HTR1BP28222 390 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 ABCG1P45844 678 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 MPP1Q00013 466 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 PPARDQ03181 441 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 LDLRAP1Q5SW96 308 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 PRR23CQ6ZRP0 262 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 KCNMB4Q86W47 210 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 PARGQ86W56 976 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 GATAD2AQ86YP4 633 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 PALM2Q8IXS6 379 aa15.32■□□□□ 0.04
SMCO4-206ENST00000596676 BEND7Q8N7W2 519 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms