RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 PACSIN2Q9UNF0 486 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 LHX6Q9UPM6 363 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 ST14Q9Y5Y6 855 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 ARHGEF17Q96PE2 2063 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 GLYATL1P3A0A0U1RQE8 302 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 F5H423 210 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 PLD2O14939 933 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 AURKAO14965 403 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 STX7O15400 261 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 TLX3O43711 291 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 KCNJ13O60928 360 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 CRTAMO95727 393 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 ITGA2BP08514 1039 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 TAF1AQ15573 450 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 LDLRAP1Q5SW96 308 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 AADACL2Q6P093 401 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 RANBP10Q6VN20 620 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 ADGRG6Q86SQ4 1221 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 PIM3Q86V86 326 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 SFRP1Q8N474 314 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 TTC25Q96NG3 672 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 SARS2Q9NP81 518 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 ASCL3Q9NQ33 180 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 SMOXQ9NWM0 555 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 GUCA1BQ9UMX6 200 aa17.53■□□□□ 0.4
SHKBP1-204ENST00000594862 IGSF10Q6WRI0 2623 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 PSMD3O43242 534 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 CDK14O94921 469 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 F3P13726 295 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 ZNF8P17098 575 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 LPOP22079 712 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 ALDH4A1P30038 563 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 ADRA1AP35348 466 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 ZFP36L1Q07352 338 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 SQSTM1Q13501 440 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 INSCQ1MX18 579 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 PARP6Q2NL67 630 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 FAM182AQ5T1J6 154 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 RAB11FIP2Q7L804 512 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 SLC9B2Q86UD5 537 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 SFTPA2Q8IWL1 248 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 KLHDC8BQ8IXV7 354 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 FBXO39Q8N4B4 442 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 GDAP1Q8TB36 358 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 SLC35B2Q8TB61 432 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 CCDC110Q8TBZ0 833 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 SLC37A2Q8TED4 501 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 SLC46A1Q96NT5 459 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 CMKLR1Q99788 373 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 FAM118BQ9BPY3 351 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 EPB41L1Q9H4G0 881 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 C10orf88Q9H8K7 445 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 BPIFA1Q9NP55 256 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 IL26Q9NPH9 171 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 KCNK4Q9NYG8 393 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 PLEKHM1Q9Y4G2 1056 aa17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 URB1O60287 2271 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-204ENST00000594862 ZNF106Q9H2Y7 1883 aaKnown RBP17.52■□□□□ 0.39
SHKBP1-204ENST00000594862 HGSO14964 777 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 AGTP01019 485 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 EPHA4P54764 986 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 UCNP55089 124 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 HHEXQ03014 270 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 TRA2AQ13595 282 aaKnown RBP eCLIP17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 ATP13A5Q4VNC0 1218 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 IYDQ6PHW0 289 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 B3GNT8Q7Z7M8 397 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 CLEC14AQ86T13 490 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 SLITRK4Q8IW52 837 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 DDHD1Q8NEL9 900 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 OR10G6Q8NH81 332 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 PATE1Q8WXA2 126 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 ZNF514Q96K75 400 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 SLC38A3Q99624 504 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 TBL1YQ9BQ87 522 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 GORASP1Q9BQQ3 440 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 DPH1Q9BZG8 443 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 ZMYND15Q9H091 742 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 LRRC40Q9H9A6 602 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 ARNT2Q9HBZ2 717 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 KCNK6Q9Y257 313 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 PRKAB1Q9Y478 270 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 PCDHGA7Q9Y5G6 932 aa17.51■□□□□ 0.39
SHKBP1-204ENST00000594862 BPTFQ12830 3046 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 A0A0U1RQJ8 604 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 KLHL33A6NCF5 533 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 A6NCN8 305 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 ERI2A8K979 691 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 CDRT15L2A8MXV6 281 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 DUX1O43812 170 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 TNFSF15O95150 251 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 JMJD7P0C870 316 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 ZNF7P17097 686 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 STIP1P31948 543 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 HADHAP40939 763 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 OR1D5P58170 312 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 RPS6KA1Q15418 735 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 COL28A1Q2UY09 1125 aa17.5■□□□□ 0.39
SHKBP1-204ENST00000594862 AMZ1Q400G9 498 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms