RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 LRRK1Q38SD2 2015 aa15.05■□□□□ -0
VRK3-207ENST00000594092 RECQL5O94762 991 aaPredicted RBP15.04■□□□□ -0
VRK3-207ENST00000594092 KLHL2O95198 593 aa15.04■□□□□ -0
VRK3-207ENST00000594092 BGNP21810 368 aa15.04■□□□□ -0
VRK3-207ENST00000594092 CREB5Q02930 508 aa15.04■□□□□ -0
VRK3-207ENST00000594092 ITIH4Q14624 930 aa15.04■□□□□ -0
VRK3-207ENST00000594092 ZNF284Q2VY69 593 aa15.04■□□□□ -0
VRK3-207ENST00000594092 SETMARQ53H47 684 aaPredicted RBP15.04■□□□□ -0
VRK3-207ENST00000594092 ZNF852Q6ZMS4 543 aa15.04■□□□□ -0
VRK3-207ENST00000594092 CCDC91Q7Z6B0 441 aa15.04■□□□□ -0
VRK3-207ENST00000594092 TBC1D1Q86TI0 1168 aaPredicted RBP15.04■□□□□ -0
VRK3-207ENST00000594092 SPATA6LQ8N4H0 392 aa15.04■□□□□ -0
VRK3-207ENST00000594092 ANKS4BQ8N8V4 417 aa15.04■□□□□ -0
VRK3-207ENST00000594092 CCDC197Q8NCU1 140 aa15.04■□□□□ -0
VRK3-207ENST00000594092 RAB3IL1Q8TBN0 382 aa15.04■□□□□ -0
VRK3-207ENST00000594092 CXorf40AQ8TE69 158 aa15.04■□□□□ -0
VRK3-207ENST00000594092 AP2M1Q96CW1 435 aa15.04■□□□□ -0
VRK3-207ENST00000594092 UBXN10Q96LJ8 280 aa15.04■□□□□ -0
VRK3-207ENST00000594092 ZSCAN5AQ9BUG6 496 aa15.04■□□□□ -0
VRK3-207ENST00000594092 MECRQ9BV79 373 aa15.04■□□□□ -0
VRK3-207ENST00000594092 POPDC3Q9HBV1 291 aa15.04■□□□□ -0
VRK3-207ENST00000594092 IGSF5Q9NSI5 407 aa15.04■□□□□ -0
VRK3-207ENST00000594092 PCDHB1Q9Y5F3 818 aa15.04■□□□□ -0
VRK3-207ENST00000594092 PRSS21Q9Y6M0 314 aa15.04■□□□□ -0
VRK3-207ENST00000594092 IGLV3-16A0A075B6K0 115 aa15.03■□□□□ -0
VRK3-207ENST00000594092 FADS2P1A8MWK0 482 aa15.03■□□□□ -0
VRK3-207ENST00000594092 KLF11O14901 512 aa15.03■□□□□ -0
VRK3-207ENST00000594092 LZTS3O60299 673 aaPredicted RBP15.03■□□□□ -0
VRK3-207ENST00000594092 SNX3O60493 162 aa15.03■□□□□ -0
VRK3-207ENST00000594092 EDF1O60869 148 aaKnown RBP15.03■□□□□ -0
VRK3-207ENST00000594092 NIPSNAP2O75323 286 aa15.03■□□□□ -0
VRK3-207ENST00000594092 RNASEH2AO75792 299 aaKnown RBP15.03■□□□□ -0
VRK3-207ENST00000594092 CCDC166P0CW27 439 aa15.03■□□□□ -0
VRK3-207ENST00000594092 CD9P21926 228 aa15.03■□□□□ -0
VRK3-207ENST00000594092 PDAP1Q13442 181 aaKnown RBP15.03■□□□□ -0
VRK3-207ENST00000594092 CSHL1Q14406 222 aa15.03■□□□□ -0
VRK3-207ENST00000594092 EOGTQ5NDL2 527 aa15.03■□□□□ -0
VRK3-207ENST00000594092 ATG16L1Q676U5 607 aa15.03■□□□□ -0
VRK3-207ENST00000594092 TMEM92Q6UXU6 159 aa15.03■□□□□ -0
VRK3-207ENST00000594092 SPATS2Q86XZ4 545 aaKnown RBP15.03■□□□□ -0
VRK3-207ENST00000594092 CLDN19Q8N6F1 224 aa15.03■□□□□ -0
VRK3-207ENST00000594092 NAT14Q8WUY8 206 aa15.03■□□□□ -0
VRK3-207ENST00000594092 ANKRD49Q8WVL7 239 aa15.03■□□□□ -0
VRK3-207ENST00000594092 KCNJ9Q92806 393 aa15.03■□□□□ -0
VRK3-207ENST00000594092 FAM131CQ96AQ9 280 aa15.03■□□□□ -0
VRK3-207ENST00000594092 COPS8Q99627 209 aa15.03■□□□□ -0
VRK3-207ENST00000594092 GPR21Q99679 349 aa15.03■□□□□ -0
VRK3-207ENST00000594092 NMRAL1Q9HBL8 299 aa15.03■□□□□ -0
VRK3-207ENST00000594092 SLCO1B3Q9NPD5 702 aa15.03■□□□□ -0
VRK3-207ENST00000594092 SIRPGQ9P1W8 387 aa15.03■□□□□ -0
VRK3-207ENST00000594092 GALPQ9UBC7 116 aa15.03■□□□□ -0
VRK3-207ENST00000594092 MID2Q9UJV3 735 aa15.03■□□□□ -0
VRK3-207ENST00000594092 MMP17Q9ULZ9 603 aa15.03■□□□□ -0
VRK3-207ENST00000594092 SORCS3Q9UPU3 1222 aa15.03■□□□□ -0
VRK3-207ENST00000594092 OAS3Q9Y6K5 1087 aaKnown RBP15.03■□□□□ -0
VRK3-207ENST00000594092 TSPAN6O43657 245 aa15.03■□□□□ -0
VRK3-207ENST00000594092 VPS26AO75436 327 aa15.03■□□□□ -0
VRK3-207ENST00000594092 DNTTP04053 509 aa15.03■□□□□ -0
VRK3-207ENST00000594092 APOA4P06727 396 aa15.03■□□□□ -0
VRK3-207ENST00000594092 LTA4HP09960 611 aaKnown RBP15.03■□□□□ -0
VRK3-207ENST00000594092 SLC26A3P40879 764 aa15.03■□□□□ -0
VRK3-207ENST00000594092 B4GALNT1Q00973 533 aa15.03■□□□□ -0
VRK3-207ENST00000594092 CCDC15Q0P6D6 951 aa15.03■□□□□ -0
VRK3-207ENST00000594092 TSNAXIP1Q2TAA8 658 aa15.03■□□□□ -0
VRK3-207ENST00000594092 GPRC6AQ5T6X5 926 aa15.03■□□□□ -0
VRK3-207ENST00000594092 ZNF765Q7L2R6 523 aa15.03■□□□□ -0
VRK3-207ENST00000594092 SPATA21Q7Z572 469 aa15.03■□□□□ -0
VRK3-207ENST00000594092 ZNF687Q8N1G0 1237 aa15.03■□□□□ -0
VRK3-207ENST00000594092 HEXDCQ8WVB3 486 aa15.03■□□□□ -0
VRK3-207ENST00000594092 NUS1Q96E22 293 aa15.03■□□□□ -0
VRK3-207ENST00000594092 SLC30A3Q99726 388 aa15.03■□□□□ -0
VRK3-207ENST00000594092 UNKQ9C0B0 810 aaKnown RBP15.03■□□□□ -0
VRK3-207ENST00000594092 ARHGEF3Q9NR81 526 aa15.03■□□□□ -0
VRK3-207ENST00000594092 FBXL12Q9NXK8 326 aa15.03■□□□□ -0
VRK3-207ENST00000594092 GNPTGQ9UJJ9 305 aa15.03■□□□□ -0
VRK3-207ENST00000594092 TRIOO75962 3097 aa15.02■□□□□ -0
VRK3-207ENST00000594092 IQCF5A8MTL0 148 aa15.02■□□□□ -0
VRK3-207ENST00000594092 PYGLP06737 847 aa15.02■□□□□ -0
VRK3-207ENST00000594092 C7P10643 843 aa15.02■□□□□ -0
VRK3-207ENST00000594092 CHRNB1P11230 501 aa15.02■□□□□ -0
VRK3-207ENST00000594092 ZNF37AP17032 561 aaPredicted RBP15.02■□□□□ -0
VRK3-207ENST00000594092 CHRM3P20309 590 aa15.02■□□□□ -0
VRK3-207ENST00000594092 NSG1P42857 185 aa15.02■□□□□ -0
VRK3-207ENST00000594092 GLRBP48167 497 aa15.02■□□□□ -0
VRK3-207ENST00000594092 KPNA2P52292 529 aaKnown RBP15.02■□□□□ -0
VRK3-207ENST00000594092 PRKCQQ04759 706 aa15.02■□□□□ -0
VRK3-207ENST00000594092 CHI3L2Q15782 390 aa15.02■□□□□ -0
VRK3-207ENST00000594092 FAM83EQ2M2I3 478 aa15.02■□□□□ -0
VRK3-207ENST00000594092 AGAP9Q5VTM2 703 aa15.02■□□□□ -0
VRK3-207ENST00000594092 PTRHD1Q6GMV3 140 aaKnown RBP15.02■□□□□ -0
VRK3-207ENST00000594092 LRRC8EQ6NSJ5 796 aa15.02■□□□□ -0
VRK3-207ENST00000594092 PAQR3Q6TCH7 311 aa15.02■□□□□ -0
VRK3-207ENST00000594092 MACC1Q6ZN28 852 aa15.02■□□□□ -0
VRK3-207ENST00000594092 Q6ZS52 159 aa15.02■□□□□ -0
VRK3-207ENST00000594092 PELI3Q8N2H9 469 aa15.02■□□□□ -0
VRK3-207ENST00000594092 FSTL5Q8N475 847 aaPredicted RBP15.02■□□□□ -0
VRK3-207ENST00000594092 TMEM151AQ8N4L1 468 aa15.02■□□□□ -0
VRK3-207ENST00000594092 PPP1R14CQ8TAE6 165 aa15.02■□□□□ -0
VRK3-207ENST00000594092 GANCQ8TET4 914 aa15.02■□□□□ -0
VRK3-207ENST00000594092 SIPA1Q96FS4 1042 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms