RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SUN1O94901 812 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 APRTP07741 180 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 BPIP17213 487 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 BLKP51451 505 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 MSLNQ13421 630 aaPredicted RBP19.47■□□□□ 0.71
LSM4-203ENST00000593829 INAVAQ3KP66 663 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 ZDHHC20Q5W0Z9 365 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 CCDC63Q8NA47 563 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 OR56A4Q8NGH8 313 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 PLEKHG4BQ96PX9 1271 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 ZSCAN5AQ9BUG6 496 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 SLC13A1Q9BZW2 595 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 TRIM31Q9BZY9 425 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 SLC32A1Q9H598 525 aa19.47■□□□□ 0.71
LSM4-203ENST00000593829 DCDC2BA2VCK2 349 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 TMEM202A6NGA9 273 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 TNFRSF10CO14798 259 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 CRTAMO95727 393 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 CSRP1P21291 193 aaKnown RBP19.46■□□□□ 0.71
LSM4-203ENST00000593829 DGKAP23743 735 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 GRK6P43250 576 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 PLTPP55058 493 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 SRP54P61011 504 aaKnown RBP19.46■□□□□ 0.71
LSM4-203ENST00000593829 BASP1P80723 227 aaKnown RBP19.46■□□□□ 0.71
LSM4-203ENST00000593829 SLC29A2Q14542 456 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 TRIP13Q15645 432 aaPredicted RBP19.46■□□□□ 0.71
LSM4-203ENST00000593829 ALG11Q2TAA5 492 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 TAOK1Q7L7X3 1001 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 HID1Q8IV36 788 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 LRRC34Q8IZ02 419 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 PHACTR4Q8IZ21 702 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 HIC2Q96JB3 615 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 SELENOSQ9BQE4 189 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 SPATA16Q9BXB7 569 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.46■□□□□ 0.71
LSM4-203ENST00000593829 PNMA8BQ9ULN7 279 aaPredicted RBP19.46■□□□□ 0.71
LSM4-203ENST00000593829 SNX24Q9Y343 169 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 ARL5AQ9Y689 179 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 ASCC3Q8N3C0 2202 aaKnown RBP19.46■□□□□ 0.71
LSM4-203ENST00000593829 DNAH14Q0VDD8 3507 aa19.46■□□□□ 0.71
LSM4-203ENST00000593829 STX7O15400 261 aaKnown RBP19.45■□□□□ 0.7
LSM4-203ENST00000593829 LPOP22079 712 aaPredicted RBP19.45■□□□□ 0.7
LSM4-203ENST00000593829 HK3P52790 923 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 PDE1BQ01064 536 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 CDH17Q12864 832 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 CRYMQ14894 314 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 PPP1R21Q6ZMI0 780 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 TRPM8Q7Z2W7 1104 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 KANSL1Q7Z3B3 1105 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 TRAM1L1Q8N609 369 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 DNAAF3Q8N9W5 541 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 RHBDD1Q8TEB9 315 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 N4BP2L2Q92802 583 aaPredicted RBP19.45■□□□□ 0.7
LSM4-203ENST00000593829 TSACCQ96A04 125 aaPredicted RBP19.45■□□□□ 0.7
LSM4-203ENST00000593829 EIF2B3Q9NR50 452 aaKnown RBP19.45■□□□□ 0.7
LSM4-203ENST00000593829 APOBEC3BQ9UH17 382 aaKnown RBP19.45■□□□□ 0.7
LSM4-203ENST00000593829 RIPK2O43353 540 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 BUD23O43709 281 aaKnown RBP19.45■□□□□ 0.7
LSM4-203ENST00000593829 RASGRP1O95267 797 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 GAS8O95995 478 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 TPH1P17752 444 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 PDPK2PQ6A1A2 396 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 RD3Q7Z3Z2 195 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 SLC25A45Q8N413 288 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 DEFB124Q8NES8 71 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 OR52K1Q8NGK4 314 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 ART4Q93070 314 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 CAMK1GQ96NX5 476 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 CAAP1Q9H8G2 361 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 FGF22Q9HCT0 170 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 SPASTQ9UBP0 616 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 DGKBQ9Y6T7 804 aa19.45■□□□□ 0.7
LSM4-203ENST00000593829 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.44■□□□□ 0.7
LSM4-203ENST00000593829 FADS2P1A8MWK0 482 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 INPP4BO15327 924 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 TNFP01375 233 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 RPL21P46778 160 aaKnown RBP19.44■□□□□ 0.7
LSM4-203ENST00000593829 VPS41P49754 854 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 GPS1Q13098 491 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 TRMT10CQ7L0Y3 403 aaKnown RBP19.44■□□□□ 0.7
LSM4-203ENST00000593829 RBFAQ8N0V3 343 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 GBP7Q8N8V2 638 aaPredicted RBP19.44■□□□□ 0.7
LSM4-203ENST00000593829 ZNF548Q8NEK5 533 aaPredicted RBP19.44■□□□□ 0.7
LSM4-203ENST00000593829 OR1E3Q8WZA6 343 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 COX14Q96I36 57 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 TBATAQ96M53 351 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 PLCD4Q9BRC7 762 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 FRMD8Q9BZ67 464 aaPredicted RBP19.44■□□□□ 0.7
LSM4-203ENST00000593829 TCEAL2Q9H3H9 227 aaPredicted RBP19.44■□□□□ 0.7
LSM4-203ENST00000593829 PIH1D1Q9NWS0 290 aaKnown RBP19.44■□□□□ 0.7
LSM4-203ENST00000593829 UCKL1Q9NWZ5 548 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 PCOLCE2Q9UKZ9 415 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 BTBD3Q9Y2F9 522 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 NEU2Q9Y3R4 380 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 CABIN1Q9Y6J0 2220 aa19.44■□□□□ 0.7
LSM4-203ENST00000593829 NEMP2A6NFY4 417 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 ECEL1O95672 775 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 CEACAM5P06731 702 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 SPAM1P38567 509 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 PPP1R7Q15435 360 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms