RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SPARCL1Q14515 664 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 RPS6KA1Q15418 735 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 TAF1AQ15573 450 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 OASLQ15646 514 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 TBC1D25Q3MII6 688 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 SEL1L2Q5TEA6 688 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 FAM151BQ6UXP7 276 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 ZNF547Q8IVP9 402 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 SFRP1Q8N474 314 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 SLC37A2Q8TED4 501 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 FGF11Q92914 225 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 RTP4Q96DX8 246 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 PPP1R2P1Q96PQ5 205 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 TBL1YQ9BQ87 522 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 FOXP3Q9BZS1 431 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 UGT1A7Q9HAW7 530 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 UGT1A10Q9HAW8 530 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 UGT1A8Q9HAW9 530 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 ASCL3Q9NQ33 180 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 PKP3Q9Y446 797 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 KCTD3Q9Y597 815 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 NBEAQ8NFP9 2946 aa18.26■□□□□ 0.51
SHKBP1-202ENST00000593764 PRR19A6NJB7 356 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 STX7O15400 261 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 LIASO43766 372 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 CDK14O94921 469 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 LPOP22079 712 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 ALDH4A1P30038 563 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 GPR3P46089 330 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 FASLGP48023 281 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 CLCNKAP51800 687 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 TMEM115Q12893 351 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 C3orf38Q5JPI3 329 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 IYDQ6PHW0 289 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 IGF2-ASQ6U949 168 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 ARHGEF18Q6ZSZ5 1173 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 OR4K2Q8NGD2 314 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 SNIP1Q8TAD8 396 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 BRSK1Q8TDC3 778 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 LIN37Q96GY3 246 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 SLC46A1Q96NT5 459 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 GRPEL1Q9HAV7 217 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 PCDHGA8Q9Y5G5 932 aa18.25■□□□□ 0.51
SHKBP1-202ENST00000593764 ITPR1Q14643 2758 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 GLYATL1P3A0A0U1RQE8 302 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 C2orf81A6NN90 581 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 CD1CP29017 333 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 STIP1P31948 543 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 CCKBRP32239 447 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 ACTN2P35609 894 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 EIF2S3P41091 472 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 INHBCP55103 352 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 SIX1Q15475 284 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 CRTC3Q6UUV7 619 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 C11orf96Q7Z7L8 435 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 LRRTM4Q86VH4 590 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 SLITRK4Q8IW52 837 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 LSMEM2Q8N112 164 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 WDR36Q8NI36 951 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 ZNF578Q96N58 590 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 TLR10Q9BXR5 811 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 FRMD8P1Q9BZ68 369 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 RDH14Q9HBH5 336 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 PRDM8Q9NQV8 689 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 KLC4Q9NSK0 619 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 PPP2R2CQ9Y2T4 447 aa18.24■□□□□ 0.51
SHKBP1-202ENST00000593764 ZFYVE26Q68DK2 2539 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 CCDC187A0A096LP49 1063 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 KMOO15229 486 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 ZNF7P17097 686 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 ERVPABLB-1P60509 514 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 XIAPP98170 497 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 CFHR1Q03591 330 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 SQSTM1Q13501 440 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 AMZ1Q400G9 498 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 C19orf48Q6RUI8 117 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 ZNF574Q6ZN55 896 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 USP53Q70EK8 1073 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 DDHD1Q8NEL9 900 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 ZNF398Q8TD17 642 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 HNRNPLLQ8WVV9 542 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 C1orf54Q8WWF1 131 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 TMEM74Q96NL1 305 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 ALS2CR12Q96Q35 445 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 SEMA6CQ9H3T2 930 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 SMOXQ9NWM0 555 aa18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 FEZ2Q9UHY8 353 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-202ENST00000593764 IGHV1OR21-1A0A087WYE8 117 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 TMX2-CTNND1H3BSU7 103 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 LDB2O43679 373 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 SNX2O60749 519 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 CPNE6O95741 557 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 F3P13726 295 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 ZNF140P52738 457 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 ITGA9Q13797 1035 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 P3H1Q32P28 736 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 PLA2G4EQ3MJ16 856 aa18.22■□□□□ 0.51
SHKBP1-202ENST00000593764 LDLRAP1Q5SW96 308 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms