RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ALDH4A1P30038 563 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 FASLGP48023 281 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 ZNF75DP51815 510 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 CYP4F2P78329 520 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 FOXK1P85037 733 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 CLPPQ16740 277 aaPredicted RBP13.06□□□□□ -0.32
H3F3B-213ENST00000593254 MAP9Q49MG5 647 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 PIM3Q86V86 326 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 RCOR2Q8IZ40 523 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 SFRP1Q8N474 314 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 ZSCAN1Q8NBB4 408 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 GPR26Q8NDV2 337 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 KRT35Q92764 455 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 P3H4Q92791 437 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 TMEM159Q96B96 161 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 RBM41Q96IZ5 413 aaKnown RBP13.06□□□□□ -0.32
H3F3B-213ENST00000593254 ZSCAN5AQ9BUG6 496 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 ADNPQ9H2P0 1102 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 RMI1Q9H9A7 625 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 RDH14Q9HBH5 336 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 RAD18Q9NS91 495 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 PISDQ9UG56 409 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 ZNHIT2Q9UHR6 403 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 MAN2B2Q9Y2E5 1009 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
H3F3B-213ENST00000593254 LOXL2Q9Y4K0 774 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 LRBAP50851 2863 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 PRAMEF33A0A0G2JMD5 474 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 RCCD1A6NED2 376 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 SOWAHDA6NJG2 315 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 NUAK1O60285 661 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 PRAMEF10O60809 474 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 PMPCBO75439 489 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 NDUFA10O95299 355 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 EML2O95834 649 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 JMJD7P0C870 316 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 CD1CP29017 333 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 BIRC2Q13490 618 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 SQSTM1Q13501 440 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 PPP2R5EQ16537 467 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 AMZ1Q400G9 498 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 ZNF569Q5MCW4 686 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 PDPK2PQ6A1A2 396 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 KDELC1Q6UW63 502 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 BBS12Q6ZW61 710 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 CHST15Q7LFX5 561 aaPredicted RBP13.05□□□□□ -0.32
H3F3B-213ENST00000593254 DAAM2Q86T65 1068 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 ZC3H18Q86VM9 953 aaKnown RBP13.05□□□□□ -0.32
H3F3B-213ENST00000593254 CCDC50Q8IVM0 306 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 SLC37A2Q8TED4 501 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 QKIQ96PU8 341 aaKnown RBP eCLIP13.05□□□□□ -0.32
H3F3B-213ENST00000593254 SRPK1Q96SB4 655 aaKnown RBP13.05□□□□□ -0.32
H3F3B-213ENST00000593254 VAT1Q99536 393 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 CMKLR1Q99788 373 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 NUDT22Q9BRQ3 303 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 SPATA16Q9BXB7 569 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 GPR63Q9BZJ6 419 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 RBSNQ9H1K0 784 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 CARD9Q9H257 536 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 SEMA6CQ9H3T2 930 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 UBP1Q9NZI7 540 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 FOXJ2Q9P0K8 574 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 FAM153AQ9UHL3 310 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 PRKAB1Q9Y478 270 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 SPO11Q9Y5K1 396 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 ADGRG1Q9Y653 693 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 EPN1Q9Y6I3 576 aaPredicted RBP13.05□□□□□ -0.32
H3F3B-213ENST00000593254 PRRC2CQ9Y520 2896 aaKnown RBP13.05□□□□□ -0.32
H3F3B-213ENST00000593254 CSMD1Q96PZ7 3565 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 CRYBG3Q68DQ2 2970 aa13.05□□□□□ -0.32
H3F3B-213ENST00000593254 ZNF106Q9H2Y7 1883 aaKnown RBP13.04□□□□□ -0.32
H3F3B-213ENST00000593254 IGHV1OR21-1A0A087WYE8 117 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 LOC285095A0A1B0GVY8 99 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 A6NCN8 305 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 HACD1B0YJ81 288 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 GPR89AB7ZAQ6 455 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.04□□□□□ -0.32
H3F3B-213ENST00000593254 APOC4-APOC2K7ER74 178 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 AURKAO14965 403 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 APOC2P02655 101 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 SLC4A1P02730 911 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 GPR89BP0CG08 455 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 ACP5P13686 325 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 BPIP17213 487 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 ITIH1P19827 911 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 NFKB1P19838 968 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 CTNNA1P35221 906 aaKnown RBP13.04□□□□□ -0.32
H3F3B-213ENST00000593254 WNT3AP56704 352 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 COPS2P61201 443 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 C16orf72Q14CZ0 275 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 IGFBP7Q16270 282 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 SKIDA1Q1XH10 827 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.04□□□□□ -0.32
H3F3B-213ENST00000593254 PHF19Q5T6S3 580 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 ALS2CLQ60I27 953 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 CCDC70Q6NSX1 233 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 ZFAND4Q86XD8 727 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 PTRH1Q86Y79 214 aaKnown RBP13.04□□□□□ -0.32
H3F3B-213ENST00000593254 TMTC1Q8IUR5 882 aa13.04□□□□□ -0.32
H3F3B-213ENST00000593254 ZNF567Q8N184 647 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms