RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 ELMO2Q96JJ3 720 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 C9orf72Q96LT7 481 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 TGM7Q96PF1 710 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 BPIFA3Q9BQP9 254 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 SPATA16Q9BXB7 569 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 BRD8Q9H0E9 1235 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 TMEM63CQ9P1W3 806 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 SLC23A2Q9UGH3 650 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 PLAAQ9Y263 795 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 TP53TG5Q9Y2B4 290 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 DNAJC16Q9Y2G8 782 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 ADGRG1Q9Y653 693 aa17.24■□□□□ 0.35
RETREG3-212ENST00000593251 K7EM74 188 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 KCNK1O00180 336 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 SLC25A14O95258 325 aaPredicted RBP17.23■□□□□ 0.35
RETREG3-212ENST00000593251 JCHAINP01591 159 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 C9P02748 559 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 FURINP09958 794 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 ANKRD34CP0C6C1 535 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 LEPRP48357 1165 aaKnown RBP17.23■□□□□ 0.35
RETREG3-212ENST00000593251 TAS2R40P59535 323 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 ERV3-1Q14264 604 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 NR1I3Q14994 352 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 SEPT7Q16181 437 aaKnown RBP17.23■□□□□ 0.35
RETREG3-212ENST00000593251 ZNF569Q5MCW4 686 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 TMEM26Q6ZUK4 368 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 ADGRG6Q86SQ4 1221 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 CCDC13Q8IYE1 715 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 GALNT6Q8NCL4 622 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 GPR26Q8NDV2 337 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 OR6C1Q96RD1 312 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 ZNF670Q9BS34 389 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 CEP41Q9BYV8 373 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 EPB41L1Q9H4G0 881 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 HAUS2Q9NVX0 235 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 ZNF624Q9P2J8 865 aaPredicted RBP17.23■□□□□ 0.35
RETREG3-212ENST00000593251 CROTQ9UKG9 612 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 SHOC2Q9UQ13 582 aa17.23■□□□□ 0.35
RETREG3-212ENST00000593251 LRRK2Q5S007 2527 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 RGSL1A5PLK6 1076 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 KIF1CO43896 1103 aaKnown RBP17.22■□□□□ 0.35
RETREG3-212ENST00000593251 MTX2O75431 263 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 MTA2O94776 668 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 KIAA0754O94854 1291 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 UBXN7O94888 489 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 SERPINC1P01008 464 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 VIPP01282 170 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 AMD1P17707 334 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 SLC19A1P41440 591 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 CLCNKAP51800 687 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 ZBTB17Q13105 803 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 SEPT6Q14141 434 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 MAP7Q14244 749 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 INSCQ1MX18 579 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 C6orf15Q6UXA7 325 aaPredicted RBP17.22■□□□□ 0.35
RETREG3-212ENST00000593251 TRIM48Q8IWZ4 208 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 CNTD1Q8N815 330 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 CPLX3Q8WVH0 158 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 HDAC11Q96DB2 347 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 ZFYVE1Q9HBF4 777 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 TRIM39Q9HCM9 518 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 KCNMB2Q9Y691 235 aa17.22■□□□□ 0.35
RETREG3-212ENST00000593251 PDZK1P1A8MUH7 402 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 GOLGA6L22H0YM25 854 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 KATNA1O75449 491 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 RASSF9O75901 435 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 MBD3O95983 291 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 SERPING1P05155 500 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 ZNF7P17097 686 aaPredicted RBP17.21■□□□□ 0.35
RETREG3-212ENST00000593251 XRCC1P18887 633 aaPredicted RBP17.21■□□□□ 0.35
RETREG3-212ENST00000593251 RPL10P27635 214 aaKnown RBP17.21■□□□□ 0.35
RETREG3-212ENST00000593251 KLRB1Q12918 225 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 PDK2Q15119 407 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 CRTC2Q53ET0 693 aaPredicted RBP17.21■□□□□ 0.35
RETREG3-212ENST00000593251 FIGNQ5HY92 759 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 ALKBH5Q6P6C2 394 aaKnown RBP17.21■□□□□ 0.35
RETREG3-212ENST00000593251 TMEM135Q86UB9 458 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 RASGRP3Q8IV61 690 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 AVL9Q8NBF6 648 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 RSC1A1Q92681 617 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 FAF2Q96CS3 445 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 ADGRE3Q9BY15 652 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 TRIM10Q9UDY6 481 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 KCTD3Q9Y597 815 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 PCDHB3Q9Y5E6 796 aa17.21■□□□□ 0.35
RETREG3-212ENST00000593251 BZW2Q9Y6E2 419 aaKnown RBP17.21■□□□□ 0.35
RETREG3-212ENST00000593251 CLEC18AA5D8T8 446 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 CHUKO15111 745 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 MTSS1O43312 755 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 NDUFA10O95299 355 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 BRAFP15056 766 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 MX2P20592 715 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 PCSK7Q16549 785 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 KHDC1Q4VXA5 237 aaKnown RBP17.2■□□□□ 0.34
RETREG3-212ENST00000593251 ZFYVE27Q5T4F4 411 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 CLEC18BQ6UXF7 455 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 FAM92BQ6ZTR7 304 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 MAP7D3Q8IWC1 876 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 CLEC18CQ8NCF0 446 aa17.2■□□□□ 0.34
RETREG3-212ENST00000593251 GLYATL1Q969I3 302 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms