RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 TTC19Q6DKK2 380 aaPredicted RBP25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 ZNF765Q7L2R6 523 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 DET1Q7L5Y6 550 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 TRIM74Q86UV6 250 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 SPATA6LQ8N4H0 392 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 LKAAEAR1Q8TD35 194 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 TCP10LQ8TDR4 215 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 ACMSDQ8TDX5 336 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 TTC1Q99614 292 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 COPS8Q99627 209 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 CHRDQ9H2X0 955 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 SMOXQ9NWM0 555 aa25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 CORO1CQ9ULV4 474 aaPredicted RBP25.34■■□□□ 1.65
LDLRAD4-218ENST00000592991 GPR1P46091 355 aa25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 PXNP49023 591 aaPredicted RBP25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 WSCD2Q2TBF2 565 aa25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 GLYATL1Q969I3 302 aa25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 CLDN23Q96B33 292 aa25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 ALKBH8Q96BT7 664 aaKnown RBP25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 TPSD1Q9BZJ3 242 aa25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 CLPBQ9H078 707 aa25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 SSU72Q9NP77 194 aaKnown RBP25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 CNOT6Q9ULM6 557 aaKnown RBP25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 CYP8B1Q9UNU6 501 aa25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 SMG5Q9UPR3 1016 aaKnown RBP25.33■■□□□ 1.65
LDLRAD4-218ENST00000592991 PAK4O96013 591 aaPredicted RBP25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 MPOP05164 745 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 AKT1P31749 480 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 PPARGP37231 505 aaPredicted RBP25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 RPS21P63220 83 aaKnown RBP25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 MTAPQ13126 283 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 ITIH4Q14624 930 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 TMEM259Q4ZIN3 620 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 C16orf46Q6P387 395 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 TMEM207Q6UWW9 146 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 DTX3LQ8TDB6 740 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 BTN2A2Q8WVV5 523 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 SLC30A3Q99726 388 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 FZD3Q9NPG1 666 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 ITM2CQ9NQX7 267 aa25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 MBNL1Q9NR56 388 aaKnown RBP25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 USP36Q9P275 1121 aaKnown RBP25.32■■□□□ 1.64
LDLRAD4-218ENST00000592991 POLD2P49005 469 aa25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 DLG1Q12959 904 aa25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 TAF1BQ53T94 588 aaPredicted RBP25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 PTRHD1Q6GMV3 140 aaKnown RBP25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 HORMAD1Q86X24 394 aa25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 RAVER1Q8IY67 606 aaKnown RBP25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 ARFGAP2Q8N6H7 521 aa25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 KCTD4Q8WVF5 259 aa25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 GPR21Q99679 349 aa25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 MYOCQ99972 504 aa25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 PREBQ9HCU5 417 aa25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 TLK1Q9UKI8 766 aa25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 SIT1Q9Y3P8 196 aa25.31■■□□□ 1.64
LDLRAD4-218ENST00000592991 IGLV3-16A0A075B6K0 115 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 RAD51BO15315 384 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 ESR1P03372 595 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 RPS3P23396 243 aaKnown RBP eCLIP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 CRABP2P29373 138 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 ADARP55265 1226 aaKnown RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 GUCY1A3Q02108 690 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 DPTQ07507 201 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 IRF4Q15306 451 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 KIAA1161Q6NSJ0 714 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 CENPLQ8N0S6 344 aaPredicted RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 FRMD1Q8N878 549 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 SIDT2Q8NBJ9 832 aaKnown RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 DDHD1Q8NEL9 900 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 GIMAP7Q8NHV1 300 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 FUBP1Q96AE4 644 aaKnown RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 TSPAN17Q96FV3 270 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 FAM111AQ96PZ2 611 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 VPS35Q96QK1 796 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 BTBD1Q9H0C5 482 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 GPAMQ9HCL2 828 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 SARS2Q9NP81 518 aaKnown RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 MKS1Q9NXB0 559 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 SLC25A14O95258 325 aaPredicted RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 NSG1P42857 185 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 IRX4P78413 519 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 CWF19L1Q69YN2 538 aaKnown RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 CLEC14AQ86T13 490 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 TP53I13Q8NBR0 393 aaPredicted RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 DENND1AQ8TEH3 1009 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 ANKRD49Q8WVL7 239 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 RLN3Q8WXF3 142 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 LENG8Q96PV6 779 aaPredicted RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 C1QTNF1Q9BXJ1 281 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 C1QTNF2Q9BXJ5 285 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 SLC17A9Q9BYT1 436 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 CNOT10Q9H9A5 744 aaKnown RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 NKIRAS1Q9NYS0 192 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 GNPTGQ9UJJ9 305 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 EMCNQ9ULC0 261 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 PCDHB1Q9Y5F3 818 aa25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 OAS3Q9Y6K5 1087 aaKnown RBP25.3■■□□□ 1.64
LDLRAD4-218ENST00000592991 SLC31A1O15431 190 aa25.29■■□□□ 1.64
LDLRAD4-218ENST00000592991 WISP3O95389 354 aaPredicted RBP25.29■■□□□ 1.64
LDLRAD4-218ENST00000592991 CHRM3P20309 590 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms