RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 FAM129CQ86XR2 697 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 RHOT1Q8IXI2 618 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 RBM12BQ8IXT5 1001 aaKnown RBP18.63■□□□□ 0.57
CCDC43-205ENST00000592333 GLYATL1Q969I3 302 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 RTP4Q96DX8 246 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 PLEKHG4BQ96PX9 1271 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 VPS35Q96QK1 796 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 TIMM29Q9BSF4 260 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 TRABDQ9H4I3 376 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC43-205ENST00000592333 KCNK6Q9Y257 313 aa18.63■□□□□ 0.57
CCDC43-205ENST00000592333 PCYT1BQ9Y5K3 369 aaPredicted RBP18.63■□□□□ 0.57
CCDC43-205ENST00000592333 MN1Q10571 1320 aaPredicted RBP18.63■□□□□ 0.57
CCDC43-205ENST00000592333 TRBV23OR9-2A0A075B6M9 112 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 AGRPO00253 132 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 KMOO15229 486 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 MTSS1O43312 755 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 RAD1O60671 282 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 PPFIA2O75334 1257 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 NDST3O95803 873 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 EPOP01588 193 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 ZNF8P17098 575 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-205ENST00000592333 WT1P19544 449 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-205ENST00000592333 MPSTP25325 297 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 UBE2IP63279 158 aaKnown RBP18.62■□□□□ 0.57
CCDC43-205ENST00000592333 NFATC3Q12968 1075 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 NFATC2Q13469 925 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 TFDP2Q14188 446 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 MAP7Q14244 749 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 GALNT3Q14435 633 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 SKOR2Q2VWA4 1001 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-205ENST00000592333 BORAQ6PGQ7 559 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 WASH2PQ6VEQ5 465 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 NLGN4XQ8N0W4 816 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 GPR26Q8NDV2 337 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 NLGN4YQ8NFZ3 816 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-205ENST00000592333 NCSTNQ92542 709 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 SLC45A3Q96JT2 553 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 AGAP3Q96P47 875 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 OR2AG1Q9H205 316 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 CLMPQ9H6B4 373 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 WASH6PQ9NQA3 447 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 ABHD10Q9NUJ1 306 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 ZNF711Q9Y462 761 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 PRKAB1Q9Y478 270 aa18.62■□□□□ 0.57
CCDC43-205ENST00000592333 TMEM184BQ9Y519 407 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-205ENST00000592333 A0A0A6YYK5 440 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-205ENST00000592333 PRR19A6NJB7 356 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 ZNF891A8MT65 544 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-205ENST00000592333 WISP1O95388 367 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 HMGCLP35914 325 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 PPM1FP49593 454 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-205ENST00000592333 KCNC4Q03721 635 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 ABHD18Q0P651 414 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 ANKS6Q68DC2 871 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 ABRAXAS1Q6UWZ7 409 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 ADGRG6Q86SQ4 1221 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 LRRTM4Q86VH4 590 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 BRSK1Q8TDC3 778 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 LRRN4Q8WUT4 740 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 HTR3CQ8WXA8 447 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 PMEPA1Q969W9 287 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 KIAA1143Q96AT1 154 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-205ENST00000592333 TEKT5Q96M29 485 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 VAT1Q99536 393 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 GPR63Q9BZJ6 419 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 SLC25A18Q9H1K4 315 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 NHEJ1Q9H9Q4 299 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-205ENST00000592333 GLOD4Q9HC38 313 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 KLC4Q9NSK0 619 aa18.61■□□□□ 0.57
CCDC43-205ENST00000592333 TLN1Q9Y490 2541 aaKnown RBP18.61■□□□□ 0.57
CCDC43-205ENST00000592333 SPTA1P02549 2419 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 BOD1L1Q8NFC6 3051 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 SNX2O60749 519 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 C9P02748 559 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 ZNF7P17097 686 aaPredicted RBP18.6■□□□□ 0.57
CCDC43-205ENST00000592333 CSRP3P50461 194 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 HADHBP55084 474 aaKnown RBP18.6■□□□□ 0.57
CCDC43-205ENST00000592333 TAZQ16635 292 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 AGAP9Q5VTM2 703 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 ATG14Q6ZNE5 492 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 TMEM26Q6ZUK4 368 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 ZNF761Q86XN6 746 aaPredicted RBP18.6■□□□□ 0.57
CCDC43-205ENST00000592333 VSTM4Q8IW00 320 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 POT1Q9NUX5 634 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 SHOC2Q9UQ13 582 aa18.6■□□□□ 0.57
CCDC43-205ENST00000592333 POLR1CO15160 346 aaPredicted RBP18.59■□□□□ 0.57
CCDC43-205ENST00000592333 SUV39H1O43463 412 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 MFAP3LO75121 409 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 CDK14O94921 469 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 VIPP01282 170 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 KRT1P04264 644 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 FAM87AP0C7U9 286 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 LIFP15018 202 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 VCLP18206 1134 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 NOP2P46087 812 aaKnown RBP18.59■□□□□ 0.57
CCDC43-205ENST00000592333 MC1RQ01726 317 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 PRKD1Q15139 912 aaPredicted RBP18.59■□□□□ 0.57
CCDC43-205ENST00000592333 INSCQ1MX18 579 aa18.59■□□□□ 0.57
CCDC43-205ENST00000592333 CYB5D1Q6P9G0 228 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms