RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 TMEM121BQ9BXQ6 578 aaPredicted RBP11.39□□□□□ -0.59
VMP1-211ENST00000591315 CDH19Q9H159 772 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 CASS4Q9NQ75 786 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 RAD18Q9NS91 495 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 VPS18Q9P253 973 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 SLC2A6Q9UGQ3 507 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 NEU2Q9Y3R4 380 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 RNF215Q9Y6U7 377 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 PIKFYVEQ9Y2I7 2098 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 OR51F1A6NGY5 319 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 C2orf81A6NN90 581 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 E7EVH7 732 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 PSMD3O43242 534 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 GRID2O43424 1007 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 SUN1O94901 812 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 PRAMEF1O95521 474 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 ECEL1O95672 775 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 KRT14P02533 472 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 ACTN2P35609 894 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 BASP1P80723 227 aaKnown RBP11.38□□□□□ -0.59
VMP1-211ENST00000591315 B4GALNT1Q00973 533 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 TARDBPQ13148 414 aaKnown RBP eCLIP11.38□□□□□ -0.59
VMP1-211ENST00000591315 HLTFQ14527 1009 aaKnown RBP eCLIP11.38□□□□□ -0.59
VMP1-211ENST00000591315 CYP1B1Q16678 543 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 ANKRD22Q5VYY1 191 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 PAPD7Q5XG87 772 aaKnown RBP11.38□□□□□ -0.59
VMP1-211ENST00000591315 PPP1R21Q6ZMI0 780 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 CCNI2Q6ZMN8 369 aaPredicted RBP11.38□□□□□ -0.59
VMP1-211ENST00000591315 ZNF534Q76KX8 674 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 DET1Q7L5Y6 550 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 PHYKPLQ8IUZ5 450 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 NAGSQ8N159 534 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 SDR16C5Q8N3Y7 309 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 Q8N9G6 341 aaPredicted RBP11.38□□□□□ -0.59
VMP1-211ENST00000591315 ACTRT1Q8TDG2 376 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 SCG3Q8WXD2 468 aaKnown RBP11.38□□□□□ -0.59
VMP1-211ENST00000591315 GATA6Q92908 595 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 CNTNAP3BQ96NU0 1288 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 VPS35Q96QK1 796 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 CCDC3Q9BQI4 270 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 GSDMCQ9BYG8 508 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 CNTNAP3Q9BZ76 1288 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 ASB8Q9H765 288 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 PRDM8Q9NQV8 689 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 TBC1D29Q9UFV1 150 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 DNAJC16Q9Y2G8 782 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 NEUROG3Q9Y4Z2 214 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 CELSR3Q9NYQ7 3312 aa11.38□□□□□ -0.59
VMP1-211ENST00000591315 DSPP15924 2871 aaKnown RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 FAM221BA6H8Z2 402 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 MROH6A6NGR9 719 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 CHUKO15111 745 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 SNX2O60749 519 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 PHF2O75151 1096 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 SRP72O76094 671 aaKnown RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 CDK14O94921 469 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 CRTAMO95727 393 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 MC4RP32245 332 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 DUSP3P51452 185 aaPredicted RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 SESN2P58004 480 aaPredicted RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 CCL7P80098 99 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 TMEM115Q12893 351 aaPredicted RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 GPS1Q13098 491 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 ILKQ13418 452 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 C14orf28Q4W4Y0 310 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 CDCP2Q5VXM1 449 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 PDPK2PQ6A1A2 396 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 CCDC137Q6PK04 289 aaKnown RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 C11orf96Q7Z7L8 435 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 C17orf82Q86X59 251 aaPredicted RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 ZNF761Q86XN6 746 aaPredicted RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 CREG2Q8IUH2 290 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 PIANPQ8IYJ0 282 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 ARL14Q8N4G2 192 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 BEND7Q8N7W2 519 aaPredicted RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 DNAAF3Q8N9W5 541 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 MAPK15Q8TD08 544 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 CDKN2AIPNLQ96HQ2 116 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 NAPGQ99747 312 aaPredicted RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 DDX47Q9H0S4 455 aaKnown RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 SYNDIG1Q9H7V2 258 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 HOMER3Q9NSC5 361 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 KLC4Q9NSK0 619 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 NLE1Q9NVX2 485 aaPredicted RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 SCHIP1Q9P0W5 487 aaPredicted RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 FEZ2Q9UHY8 353 aaPredicted RBP11.37□□□□□ -0.59
VMP1-211ENST00000591315 MSRB2Q9Y3D2 182 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 PCDHB1Q9Y5F3 818 aa11.37□□□□□ -0.59
VMP1-211ENST00000591315 PRAMEF33A0A0G2JMD5 474 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 A0A1W2PQM1 296 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 CCDC162PA2VCL2 907 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 PMS2P1A4D2B8 440 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 A6NCN8 305 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 OR2AG2A6NM03 316 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 ERI2A8K979 691 aaKnown RBP11.36□□□□□ -0.59
VMP1-211ENST00000591315 AGRPO00253 132 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 PPM1DO15297 605 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 B4GAT1O43505 415 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 SGTAO43765 313 aa11.36□□□□□ -0.59
VMP1-211ENST00000591315 AVILO75366 819 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms