RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 CDK18Q07002 472 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 ZNF648Q5T619 568 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 PDPK2PQ6A1A2 396 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 NPNTQ6UXI9 565 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 CEACAM20Q6UY09 585 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 ARHGAP22Q7Z5H3 698 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 TMC3Q7Z5M5 1100 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 TRAM1L1Q8N609 369 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 BMPERQ8N8U9 685 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 GPR26Q8NDV2 337 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 RNF25Q96BH1 459 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 TRIB3Q96RU7 358 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 SRPK1Q96SB4 655 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 ZPBPQ9BS86 351 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 SLC12A9Q9BXP2 914 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 PRDM8Q9NQV8 689 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 KLHL3Q9UH77 587 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 ZNF711Q9Y462 761 aa17.72■□□□□ 0.43
PRKCSH-211ENST00000590098 KMOO15229 486 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 CAPN5O15484 640 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 ITGB6P18564 788 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 NOP2P46087 812 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 CLCNKAP51800 687 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 INSCQ1MX18 579 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 FAM182AQ5T1J6 154 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 LRRC38Q5VT99 294 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 ADGRG6Q86SQ4 1221 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 PLXDC1Q8IUK5 500 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 TRIM48Q8IWZ4 208 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 GLYATL1Q969I3 302 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 KIAA1143Q96AT1 154 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 RTP4Q96DX8 246 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 OLFM3Q96PB7 478 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 CTRCQ99895 268 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 TBC1D10AQ9BXI6 508 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 CLMPQ9H6B4 373 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 NHEJ1Q9H9Q4 299 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 FBXO8Q9NRD0 319 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 ABHD10Q9NUJ1 306 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 SPTLC3Q9NUV7 552 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 DDX56Q9NY93 547 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 NFKBIL1Q9UBC1 381 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 PILRAQ9UKJ1 303 aa17.71■□□□□ 0.43
PRKCSH-211ENST00000590098 PPFIA2O75334 1257 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 WISP1O95388 367 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 TNNT1P13805 278 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 MAP4P27816 1152 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 SLC1A1P43005 524 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 SLC14A2Q15849 920 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 TEX44Q53QW1 395 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 BORAQ6PGQ7 559 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 CRTC3Q6UUV7 619 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 BZW1Q7L1Q6 419 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 LRRTM4Q86VH4 590 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 RHOT1Q8IXI2 618 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 NLGN4XQ8N0W4 816 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 NLGN4YQ8NFZ3 816 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 SPATA22Q8NHS9 363 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 PLEKHG4BQ96PX9 1271 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 CHP1Q99653 195 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 GLOD4Q9HC38 313 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 ADGRG1Q9Y653 693 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 BSNQ9UPA5 3926 aa17.7■□□□□ 0.42
PRKCSH-211ENST00000590098 A0A0A6YYK5 440 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 LILRA5A6NI73 299 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 ZNF891A8MT65 544 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 CHUKO15111 745 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 POLR1CO15160 346 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 VEGFDO43915 354 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 PMPCBO75439 489 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 NDST3O95803 873 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 MT-CYBP00156 380 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 VIPP01282 170 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 TNNT3P45378 269 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 UBE2IP63279 158 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 NFKB2Q00653 900 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 CLCA4Q14CN2 919 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 PLA2G4EQ3MJ16 856 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 ATG14Q6ZNE5 492 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 B4GALNT4Q76KP1 1039 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 TADA1Q96BN2 335 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 EFHD1Q9BUP0 239 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 GPN2Q9H9Y4 310 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 UCK1Q9HA47 277 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 GEMIN8Q9NWZ8 242 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 DNAJC16Q9Y2G8 782 aa17.69■□□□□ 0.42
PRKCSH-211ENST00000590098 PDZK1P1A8MUH7 402 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 SPOPO43791 374 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 CDK14O94921 469 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 ZNF7P17097 686 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 BPIP17213 487 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 AMD1P17707 334 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 XRCC1P18887 633 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 NR2C2P49116 596 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 TFDP2Q14188 446 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 VSTM4Q8IW00 320 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 TEKT5Q96M29 485 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 CATSPER2Q96P56 530 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 TIMM29Q9BSF4 260 aa17.68■□□□□ 0.42
PRKCSH-211ENST00000590098 SLC25A18Q9H1K4 315 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms