RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SOX5P35711 763 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 STC1P52823 247 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 POLR2FP61218 127 aaKnown RBP12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 DPYSQ14117 519 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 KIR2DS5Q14953 304 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 CHRNA6Q15825 494 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 SEPT7Q16181 437 aaKnown RBP12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 PLA2G4EQ3MJ16 856 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 PLEKHN1Q494U1 663 aaPredicted RBP12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 ARMC12Q5T9G4 340 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 CACHD1Q5VU97 1274 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 LCN10Q6JVE6 187 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 DCHS2Q6V1P9 2916 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 PPP1R3BQ86XI6 285 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 CISD2Q8N5K1 135 aaKnown RBP12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 ADAMTS17Q8TE56 1095 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 THAP4Q8WY91 577 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 KLHL6Q8WZ60 621 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 MARVELD3Q96A59 401 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 C5orf34Q96MH7 638 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 SLC29A3Q9BZD2 475 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 TRIM7Q9C029 511 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 UNKQ9C0B0 810 aaKnown RBP12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 OSGEPL1Q9H4B0 414 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 EPB41L1Q9H4G0 881 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 KLC4Q9NSK0 619 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 CWC15Q9P013 229 aaKnown RBP12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 VPS18Q9P253 973 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 ADGRG1Q9Y653 693 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 MTORP42345 2549 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 AKAP9Q99996 3911 aa12.58□□□□□ -0.4
PRKCSH-210ENST00000589990 ATMINO43313 823 aaPredicted RBP12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 GRID2O43424 1007 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 MAFKO60675 156 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 CALB1P05937 261 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 ZNF8P17098 575 aaPredicted RBP12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 AMD1P17707 334 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 NELFEP18615 380 aaKnown RBP12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 PTMSP20962 102 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 HTR7P34969 479 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 CAPZBP47756 277 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 ITGA1P56199 1179 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 TPD52L1Q16890 204 aaPredicted RBP12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 PRAMEF17Q5VTA0 474 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 IRGCQ6NXR0 463 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 TRIM72Q6ZMU5 477 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 ZNF765Q7L2R6 523 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 PRSS42Q7Z5A4 293 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 SLC38A9Q8NBW4 561 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 PNPLA2Q96AD5 504 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 ZNF599Q96NL3 588 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 FAM207AQ9NSI2 230 aaPredicted RBP12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 TAB2Q9NYJ8 693 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 ATXN10Q9UBB4 475 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 NTNG1Q9Y2I2 539 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 ZNF451Q9Y4E5 1061 aa12.57□□□□□ -0.4
PRKCSH-210ENST00000589990 CCDC168Q8NDH2 2452 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 A0A0J9YYE9 177 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 A0A1W2PQ67 120 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 OR52A4PA6NMU1 304 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 TOX3O15405 576 aaPredicted RBP12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 NUAK1O60285 661 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 DPM1O60762 260 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 TRBC1P01850 177 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 EBLN1P0CF75 366 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 BRAFP15056 766 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 XRCC1P18887 633 aaPredicted RBP12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 AMPD1P23109 780 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 GPS2Q13227 327 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 TUBB3Q13509 450 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 GPR18Q14330 331 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 ERMARDQ5T6L9 678 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 DCUN1D2Q6PH85 259 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 CRTC3Q6UUV7 619 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 SYVN1Q86TM6 617 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 NLRP8Q86W28 1048 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 INPP5DQ92835 1189 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 GPR87Q9BY21 358 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 UCK1Q9HA47 277 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 NT5MQ9NPB1 228 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 SAMSN1Q9NSI8 373 aaKnown RBP12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 SEPT11Q9NVA2 429 aaKnown RBP12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 TAS2R14Q9NYV8 317 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 CHKBQ9Y259 395 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 DNAJC16Q9Y2G8 782 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 MDC1Q14676 2089 aaKnown RBP12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 SPTBP11277 2137 aa12.56□□□□□ -0.4
PRKCSH-210ENST00000589990 ANKUB1A6NFN9 424 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 OR5K4A6NMS3 321 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 F5H423 210 aaPredicted RBP12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 DDX3YO15523 660 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 LRCH4O75427 683 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 PRLP01236 227 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 VIPP01282 170 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 MT-ND3P03897 115 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 TCF4P15884 667 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 IL4RP24394 825 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 PSMA2P25787 234 aa12.55□□□□□ -0.4
PRKCSH-210ENST00000589990 RPL10P27635 214 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms