RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 CACUL1Q86Y37 369 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 CACNA2D3Q8IZS8 1091 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 NKAPQ8N5F7 415 aaKnown RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 SIDT2Q8NBJ9 832 aaKnown RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 OR2T3Q8NH03 318 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 GIMAP7Q8NHV1 300 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 SREK1Q8WXA9 508 aaKnown RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 PPM1EQ8WY54 764 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 SCAMP4Q969E2 229 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 FAM136AQ96C01 138 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 DTD2Q96FN9 168 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 SEC16BQ96JE7 1060 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 COQ10AQ96MF6 247 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 C7orf26Q96N11 449 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 GUCD1Q96NT3 240 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 COPS8Q99627 209 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 ELAC2Q9BQ52 826 aaKnown RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 ZSCAN5AQ9BUG6 496 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 WRAP53Q9BUR4 548 aaKnown RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 RIOK2Q9BVS4 552 aaKnown RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 FBRSQ9HAH7 460 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 OXSMQ9NWU1 459 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 TMPRSS11EQ9UL52 423 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 PRSS21Q9Y6M0 314 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 LRRK1Q38SD2 2015 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 ERICH4A6NGS2 130 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 NEMP1O14524 444 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 WNT9AO14904 365 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 MID1O15344 667 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 NARSO43776 548 aaKnown RBP11.29□□□□□ -0.6
SMAD4-205ENST00000588745 H2AFYO75367 372 aaKnown RBP11.29□□□□□ -0.6
SMAD4-205ENST00000588745 C6P13671 934 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 GLULP15104 373 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 TFEBP19484 476 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 CHRM3P20309 590 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 C5AR1P21730 350 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 GRK2P25098 689 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 DRD3P35462 400 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 SKIV2L2P42285 1042 aaKnown RBP11.29□□□□□ -0.6
SMAD4-205ENST00000588745 CLCN7P51798 805 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 COPAP53621 1224 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 PRKAA2P54646 552 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 ATP6V0D1P61421 351 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 B4GALNT1Q00973 533 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 OCRLQ01968 901 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 STX3Q13277 289 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 ZSCAN26Q16670 478 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 C2orf27AQ580R0 203 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 GPRC6AQ5T6X5 926 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 AGBL4Q5VU57 503 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 LIPMQ5VYY2 423 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 CES4AQ5XG92 561 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 KIAA1211LQ6NV74 962 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 GPR153Q6NV75 609 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 PAQR3Q6TCH7 311 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 MACC1Q6ZN28 852 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 ZNF765Q7L2R6 523 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 SPATA21Q7Z572 469 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 AADATQ8N5Z0 425 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 IL17RCQ8NAC3 791 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 CCDC197Q8NCU1 140 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 DDHD1Q8NEL9 900 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 OR6Y1Q8NGX8 325 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 LKAAEAR1Q8TD35 194 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 AP2M1Q96CW1 435 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 NUS1Q96E22 293 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 VPS35Q96QK1 796 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 SLC30A3Q99726 388 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 DERL2Q9GZP9 239 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 ABCG8Q9H221 673 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 SLC2A4RGQ9NR83 387 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 GALPQ9UBC7 116 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 FADS3Q9Y5Q0 445 aa11.29□□□□□ -0.6
SMAD4-205ENST00000588745 IQCF5A8MTL0 148 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 FADS2P1A8MWK0 482 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 TMEM114B3SHH9 223 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 AP1G1O43747 822 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 ZBTB14O43829 449 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 DLX3O60479 287 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 TRIM13O60858 407 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 ADAM23O75077 832 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 RECQL5O94762 991 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 KLF8O95600 359 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 TSPAN12O95859 305 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 SRFP11831 508 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 HOXB2P14652 356 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 COL9A1P20849 921 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 ATP5F1P24539 256 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 RPS14P62263 151 aaKnown RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 MRPS21P82921 87 aaKnown RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 CREB5Q02930 508 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 IER5LQ5T953 404 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 PTCRAQ6ISU1 281 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 FOXR1Q6PIV2 292 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 ISCA2Q86U28 154 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 CPNE9Q8IYJ1 553 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 CLDN19Q8N6F1 224 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 TXNDC5Q8NBS9 432 aaKnown RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 RHEBL1Q8TAI7 183 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 CXorf40AQ8TE69 158 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms