RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	LINC00523	Q86TU6	105 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	ARMC7	Q9H6L4	198 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	TMEM181	Q9P2C4	612 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	ZNF639	Q9UID6	485 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	ZNF701	M0R085	212 aa	Predicted RBP	10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	PDPK1	O15530	556 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	FGF4	P08620	206 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	HOXD9	P28356	352 aa	Predicted RBP	10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	SP3	Q02447	781 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	RAD51	Q06609	339 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	SQLE	Q14534	574 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	MS4A13	Q5J8X5	152 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	ZNF362	Q5T0B9	420 aa	Predicted RBP	10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	CILP2	Q8IUL8	1156 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	ASCC1	Q8N9N2	400 aa	Known RBP	10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	CHID1	Q9BWS9	393 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	VN1R3	Q9BXE9	311 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	ZNF717	Q9BY31	904 aa	Predicted RBP	10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	TRIM15	Q9C019	465 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	RC3H2	Q9HBD1	1191 aa	Known RBP	10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	NMRAL1	Q9HBL8	299 aa		10.84	□□□□□ -0.67
ILF3-208	ENST00000587928	PCM1	Q15154	2024 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928		A0A096LPK6	155 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	CENPX	A8MT69	81 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	PAGE1	O75459	146 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	MT-CYB	P00156	380 aa	Predicted RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	COX4I1	P13073	169 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	TRIM23	P36406	574 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	ALDH1A3	P47895	512 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	FLT3LG	P49771	235 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	EMP3	P54852	163 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	PPP2R2B	Q00005	443 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	YWHAH	Q04917	246 aa	Predicted RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	BTN2A1	Q7KYR7	527 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	HASPIN	Q8TF76	798 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	ZNF669	Q96BR6	464 aa	Predicted RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	LMLN	Q96KR4	655 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	HIPK3	Q9H422	1215 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	TEKT2	Q9UIF3	430 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	PRPF19	Q9UMS4	504 aa	Known RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	SLC8A2	Q9UPR5	921 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	NCOR1	O75376	2440 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928		H0Y858	1186 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928		H0YJX3	145 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	BMP10	O95393	424 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	SLC2A3	P11169	496 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	ARSA	P15289	507 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	UGT1A6	P19224	532 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	UGT1A1	P22309	533 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	UGT1A4	P22310	534 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	CD52	P31358	61 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	UGT1A3	P35503	534 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	UGT1A5	P35504	534 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	KPNA2	P52292	529 aa	Known RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	ZNF140	P52738	457 aa	Predicted RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	CDKN2D	P55273	166 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	DAB2	P98082	770 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	TRIM32	Q13049	653 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	XKR7	Q5GH72	579 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	PPM1L	Q5SGD2	360 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	HDDC2	Q7Z4H3	204 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	ISCA2	Q86U28	154 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	CDH24	Q86UP0	819 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	STX12	Q86Y82	276 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	DENND6A	Q8IWF6	608 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	TBL1Y	Q9BQ87	522 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	ACE2	Q9BYF1	805 aa	Predicted RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	TLR9	Q9NR96	1032 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	PADI3	Q9ULW8	664 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	AP4B1	Q9Y6B7	739 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	CCDC195	A0A1B0GUA6	201 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	TEX51	A0A1B0GUA7	166 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928		E9PAM4	449 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928		H3BSA7	217 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	GAPDHS	O14556	408 aa	Predicted RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	USP12	O75317	370 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	BCAS2	O75934	225 aa	Predicted RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	GNRH1	P01148	92 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	ZNF23	P17027	643 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	MPST	P25325	297 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	PRMT2	P55345	433 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	TUSC3	Q13454	348 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	STK11	Q15831	433 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	HMBOX1	Q6NT76	420 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	ESRP1	Q6NXG1	681 aa	Known RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	FAM9C	Q8IZT9	166 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	FUBP3	Q96I24	572 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	HHIPL1	Q96JK4	782 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	ATOH8	Q96SQ7	321 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	YME1L1	Q96TA2	773 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	MFSD1	Q9H3U5	465 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	TUBB1	Q9H4B7	451 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	RPRD1B	Q9NQG5	326 aa	Known RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	CCL27	Q9Y4X3	112 aa		10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	COPG1	Q9Y678	874 aa	Known RBP	10.83	□□□□□ -0.68
ILF3-208	ENST00000587928	SOBP	A7XYQ1	873 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ANXA9	O76027	345 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ALDOC	P09972	364 aa	Known RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	HAPLN1	P10915	354 aa	Predicted RBP	10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms