RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 YBEYP58557 167 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 RAD51Q06609 339 aa16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 CYBRD1Q53TN4 286 aa16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 ABRAXAS1Q6UWZ7 409 aa16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 PATL1Q86TB9 770 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 MIB1Q86YT6 1006 aa16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 COLGALT2Q8IYK4 626 aa16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 KIAA2013Q8IYS2 634 aa16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 TBC1D21Q8IYX1 336 aa16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 FUBP1Q96AE4 644 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 RPL10LQ96L21 214 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 C1QTNF3Q9BXJ4 246 aa16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 NUSAP1Q9BXS6 441 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 HIPK3Q9H422 1215 aa16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 SMPD3Q9NY59 655 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 ANAPC2Q9UJX6 822 aa16.73■□□□□ 0.27
PRKCSH-205ENST00000587327 CCDC154A6NI56 674 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 SNAP91O60641 907 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 OAZ2O95190 189 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 ESRRBO95718 433 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 SERPINF2P08697 491 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 NCK1P16333 377 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 PRDX3P30048 256 aaKnown RBP16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 CAPGP40121 348 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 UFM1P61960 85 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 TRIP4Q15650 581 aaPredicted RBP16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 FUT11Q495W5 492 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 AASDHQ4L235 1098 aaPredicted RBP16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 XKR7Q5GH72 579 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 KLHL35Q6PF15 583 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 GLB1LQ6UWU2 654 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 RNF180Q86T96 592 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 SYVN1Q86TM6 617 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 CROCCP3Q8IVE0 287 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 TMEM199Q8N511 208 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 DHRSXQ8N5I4 330 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 FUBP3Q96I24 572 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 OSBPL6Q9BZF3 934 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 BRINP2Q9C0B6 783 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 CXorf21Q9HAI6 301 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 IRAK4Q9NWZ3 460 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 SLAMF8Q9P0V8 285 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 ZNF225Q9UK10 706 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 CDC14AQ9UNH5 594 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 CDC7O00311 574 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 NDST3O95803 873 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 UROSP10746 265 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 RPS9P46781 194 aaKnown RBP16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 EEFSECP57772 596 aaKnown RBP16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 NAA20P61599 178 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 TRIB3Q96RU7 358 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 CCDC68Q9H2F9 335 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 NLE1Q9NVX2 485 aaPredicted RBP16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 LEF1Q9UJU2 399 aaPredicted RBP16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 CDH7Q9ULB5 785 aa16.72■□□□□ 0.27
PRKCSH-205ENST00000587327 DYTNA2CJ06 578 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 MOXD2PA6NHM9 499 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 STX16O14662 325 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 KLK8O60259 260 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 SOAT2O75908 522 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 MLYCDO95822 493 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 CHEK2O96017 543 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 VARSP26640 1264 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 TTKP33981 857 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 POLR2JP52435 117 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 SP3Q02447 781 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 NFE2Q16621 373 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 NANOGP8Q6NSW7 305 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 SLC24A5Q71RS6 500 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 EFL1Q7Z2Z2 1120 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 LYSMD3Q7Z3D4 306 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 OFCC1Q8IZS5 231 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 MAGEE2Q8TD90 523 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 HHIPL1Q96JK4 782 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 TMEM74Q96NL1 305 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 PLEKHG4BQ96PX9 1271 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 SEZ6LQ9BYH1 1024 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 NANOGQ9H9S0 305 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 MARCH2Q9P0N8 246 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 ZNF639Q9UID6 485 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 PCTPQ9UKL6 214 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 ZFC3H1O60293 1989 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 NCF1BA6NI72 391 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 NCF1CA8MVU1 366 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 SNX2O60749 519 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 EOMESO95936 686 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 LDLRP01130 860 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 HMBSP08397 361 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 NCF1P14598 390 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 MAPKAPK2P49137 400 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 AGTR2P50052 363 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 ZNF140P52738 457 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 PMS2P3Q13401 168 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 PDCD4Q53EL6 469 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 ALG1LQ6GMV1 187 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 BBS5Q8N3I7 341 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 ZNF420Q8TAQ5 688 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 GPR152Q8TDT2 470 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 MYEOVQ96EZ4 313 aa16.71■□□□□ 0.27
PRKCSH-205ENST00000587327 GPR21Q99679 349 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms