RNA–Protein interactions for RNA: ENST00000586708.1

SPC24-204, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC24, Length 378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-204ENST00000586708 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.52□□□□□ -0.25
SPC24-204ENST00000586708 TRBV5-4A0A0C4DH59 114 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 CPED1A4D0V7 1026 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 PGRMC1O00264 195 aaKnown RBP13.52□□□□□ -0.25
SPC24-204ENST00000586708 NTN3O00634 580 aaPredicted RBP13.52□□□□□ -0.25
SPC24-204ENST00000586708 FANCGO15287 622 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 GRID2O43424 1007 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 SRP72O76094 671 aaKnown RBP13.52□□□□□ -0.25
SPC24-204ENST00000586708 PRAMEF1O95521 474 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 PNLIPP16233 465 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 GLB1P16278 677 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 TPH1P17752 444 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 HADHAP40939 763 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 ACTR1BP42025 376 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 GRIA1P42261 906 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 MAGEA6P43360 314 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 ACTR1AP61163 376 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 CDH17Q12864 832 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 NFATC2Q13469 925 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 ITGA9Q13797 1035 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 NR1D2Q14995 579 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 LDLRAP1Q5SW96 308 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 PAPD7Q5XG87 772 aaKnown RBP13.52□□□□□ -0.25
SPC24-204ENST00000586708 SLC30A9Q6PML9 568 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 C11orf96Q7Z7L8 435 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 MARCH9Q86YJ5 346 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 TAB3Q8N5C8 712 aaPredicted RBP13.52□□□□□ -0.25
SPC24-204ENST00000586708 OR52K1Q8NGK4 314 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 ZNF398Q8TD17 642 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 ZDHHC1Q8WTX9 485 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 RANBP9Q96S59 729 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 NAP1L3Q99457 506 aaPredicted RBP13.52□□□□□ -0.25
SPC24-204ENST00000586708 DPEP2Q9H4A9 486 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 NLE1Q9NVX2 485 aaPredicted RBP13.52□□□□□ -0.25
SPC24-204ENST00000586708 SMARCAL1Q9NZC9 954 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 GULP1Q9UBP9 304 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 PRKAB1Q9Y478 270 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.52□□□□□ -0.25
SPC24-204ENST00000586708 CELSR3Q9NYQ7 3312 aa13.52□□□□□ -0.25
SPC24-204ENST00000586708 PIKFYVEQ9Y2I7 2098 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 FAM149AA5PLN7 773 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 B4DGG1 531 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 ZNF185O15231 689 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 NUDT21O43809 227 aaKnown RBP13.51□□□□□ -0.25
SPC24-204ENST00000586708 MTX2O75431 263 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 CDK14O94921 469 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 EML2O95834 649 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 TCP1P17987 556 aaKnown RBP13.51□□□□□ -0.25
SPC24-204ENST00000586708 COILP38432 576 aaPredicted RBP13.51□□□□□ -0.25
SPC24-204ENST00000586708 TMEM115Q12893 351 aaPredicted RBP13.51□□□□□ -0.25
SPC24-204ENST00000586708 GPRC6AQ5T6X5 926 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 WDR48Q8TAF3 677 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 STYXQ8WUJ0 223 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 CCDC74AQ96AQ1 378 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 DNAJC1Q96KC8 554 aaKnown RBP13.51□□□□□ -0.25
SPC24-204ENST00000586708 CNTNAP3BQ96NU0 1288 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 CCDC3Q9BQI4 270 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 TIMM29Q9BSF4 260 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 AP1M1Q9BXS5 423 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 CNTNAP3Q9BZ76 1288 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 PIH1D1Q9NWS0 290 aaKnown RBP13.51□□□□□ -0.25
SPC24-204ENST00000586708 SLC23A2Q9UGH3 650 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 RIMKLBQ9ULI2 386 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 RNF215Q9Y6U7 377 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 DSPP15924 2871 aaKnown RBP13.51□□□□□ -0.25
SPC24-204ENST00000586708 PKD1L2Q7Z442 2459 aa13.51□□□□□ -0.25
SPC24-204ENST00000586708 IGLV3-16A0A075B6K0 115 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 KMOO15229 486 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 CASC3O15234 703 aaKnown RBP13.5□□□□□ -0.25
SPC24-204ENST00000586708 TCEA3O75764 348 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 ECEL1O95672 775 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 MT-CO3P00414 261 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 APRTP07741 180 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 ACP5P13686 325 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 TPSB2P20231 275 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 FASLGP48023 281 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 FNTAP49354 379 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 MAZP56270 477 aaKnown RBP13.5□□□□□ -0.25
SPC24-204ENST00000586708 GNG11P61952 73 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 CDK16Q00536 496 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 ACVR1Q04771 509 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 TARDBPQ13148 414 aaKnown RBP eCLIP13.5□□□□□ -0.25
SPC24-204ENST00000586708 POU6F1Q14863 301 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 TPSAB1Q15661 275 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 KIF26BQ2KJY2 2108 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 GPR33Q49SQ1 333 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 UNQ6494/PRO21346Q6UXR6 183 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 CHST15Q7LFX5 561 aaPredicted RBP13.5□□□□□ -0.25
SPC24-204ENST00000586708 LRRTM4Q86VH4 590 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 SFRP1Q8N474 314 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 ARL14Q8N4G2 192 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 RASGEF1AQ8N9B8 481 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 MAPK15Q8TD08 544 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 PATE1Q8WXA2 126 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 MAGOHBQ96A72 148 aaKnown RBP13.5□□□□□ -0.25
SPC24-204ENST00000586708 CDKN2AIPNLQ96HQ2 116 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 ZCCHC2Q9C0B9 1178 aaKnown RBP13.5□□□□□ -0.25
SPC24-204ENST00000586708 ASB8Q9H765 288 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 TBC1D29Q9UFV1 150 aa13.5□□□□□ -0.25
SPC24-204ENST00000586708 CLCA2Q9UQC9 943 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms