RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 DAAM2Q86T65 1068 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 GDAP1Q8TB36 358 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 PATE1Q8WXA2 126 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 TADA1Q96BN2 335 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 OR2AG1Q9H205 316 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 OSGEPL1Q9H4B0 414 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 POT1Q9NUX5 634 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 SHOC2Q9UQ13 582 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 KCNK6Q9Y257 313 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 EFR3BQ9Y2G0 817 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 KIF26BQ2KJY2 2108 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 SCN8AQ9UQD0 1980 aa11.12□□□□□ -0.63
ACTN4-209ENST00000586538 SMG1Q96Q15 3661 aaKnown RBP11.12□□□□□ -0.63
ACTN4-209ENST00000586538 hCG_1818297A0A087WSY0 165 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 A0A0U1RQS6 177 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 CCDC66A2RUB6 948 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 PMS2P1A4D2B8 440 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 APOC4-APOC2K7ER74 178 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 CHUKO15111 745 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 TOX3O15405 576 aaPredicted RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 SNX2O60749 519 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 PMPCBO75439 489 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 ANXA9O76027 345 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 CDK14O94921 469 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 MT-CYBP00156 380 aaPredicted RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 VIPP01282 170 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 APOC2P02655 101 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 XRCC1P18887 633 aaPredicted RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 IDSP22304 550 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 SPAM1P38567 509 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 HALP42357 657 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 GEMP55040 296 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 NAP1L1P55209 391 aaKnown RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 PDE1BQ01064 536 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 PRPSAP1Q14558 356 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 IHHQ14623 411 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 C16orf72Q14CZ0 275 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 TAZQ16635 292 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 LDLRAP1Q5SW96 308 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 NPNTQ6UXI9 565 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 PID1Q7Z2X4 250 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 GLT6D1Q7Z4J2 308 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 FAM129CQ86XR2 697 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 TMTC1Q8IUR5 882 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 SFTPA2Q8IWL1 248 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 IL22RA1Q8N6P7 574 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 TC2NQ8N9U0 490 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 RCBTB1Q8NDN9 531 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 GPR26Q8NDV2 337 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 LRRN4Q8WUT4 740 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 PTCD2Q8WV60 388 aaKnown RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 HTR3CQ8WXA8 447 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 KIAA1143Q96AT1 154 aaPredicted RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 MED8Q96G25 268 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 ZNF514Q96K75 400 aaPredicted RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 PANX2Q96RD6 677 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 FCRL5Q96RD9 977 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 WDR24Q96S15 920 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 CEP41Q9BYV8 373 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 TRIT1Q9H3H1 467 aaKnown RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 KLC4Q9NSK0 619 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 SLC39A1Q9NY26 324 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 PDP2Q9P2J9 529 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 ATXN10Q9UBB4 475 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 CPNE7Q9UBL6 633 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 TBC1D29Q9UFV1 150 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 RSPH14Q9UHP6 348 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 CNOT6Q9ULM6 557 aaKnown RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 AAR2Q9Y312 384 aaKnown RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 PCDHA13Q9Y5I0 950 aa11.11□□□□□ -0.63
ACTN4-209ENST00000586538 OAS3Q9Y6K5 1087 aaKnown RBP11.11□□□□□ -0.63
ACTN4-209ENST00000586538 LOC285095A0A1B0GVY8 99 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 PDZK1P1A8MUH7 402 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 C9orf172C9J069 976 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 CASC3O15234 703 aaKnown RBP11.1□□□□□ -0.63
ACTN4-209ENST00000586538 EFSO43281 561 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
ACTN4-209ENST00000586538 ANKRD34CP0C6C1 535 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 PYGMP11217 842 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 ZNF7P17097 686 aaPredicted RBP11.1□□□□□ -0.63
ACTN4-209ENST00000586538 ZNF8P17098 575 aaPredicted RBP11.1□□□□□ -0.63
ACTN4-209ENST00000586538 NFKB1P19838 968 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 NFATC2Q13469 925 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 KLHL35Q6PF15 583 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 WASH2PQ6VEQ5 465 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 ZNF574Q6ZN55 896 aaPredicted RBP11.1□□□□□ -0.63
ACTN4-209ENST00000586538 BBS12Q6ZW61 710 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 TMPRSS9Q7Z410 1059 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 ZC3H18Q86VM9 953 aaKnown RBP11.1□□□□□ -0.63
ACTN4-209ENST00000586538 DTX1Q86Y01 620 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 TRAPPC5Q8IUR0 188 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 CDKL3Q8IVW4 592 aaPredicted RBP11.1□□□□□ -0.63
ACTN4-209ENST00000586538 SPATA22Q8NHS9 363 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 NCSTNQ92542 709 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 TTC9Q92623 222 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 MRFAP1L1Q96HT8 127 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 QKIQ96PU8 341 aaKnown RBP eCLIP11.1□□□□□ -0.635e-8■□□□□ 9.4
ACTN4-209ENST00000586538 SMIM14Q96QK8 99 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 WASH6PQ9NQA3 447 aa11.1□□□□□ -0.63
ACTN4-209ENST00000586538 FOXJ2Q9P0K8 574 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms