RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 BOCQ9BWV1 1114 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 MRM3Q9HC36 420 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 TBC1D3BA6NDS4 549 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 SDHDO14521 159 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 PEX1O43933 1283 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 IL1BP01584 269 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 DGKAP23743 735 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 SQLEQ14534 574 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 STARD3Q14849 445 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 LRRC26Q2I0M4 334 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 ZNF184Q99676 751 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 KLF16Q9BXK1 252 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 AKTIPQ9H8T0 292 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 SLC24A3Q9HC58 644 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 GNPTGQ9UJJ9 305 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 NRP2O60462 931 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 DNAJA2O60884 412 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 MT-ND1P03886 318 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 CAPN1P07384 714 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 ITPKAP23677 461 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 GRIA3P42263 894 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 RPL38P63173 70 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 NRG1Q02297 640 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 RFTN1Q14699 578 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 C18orf21Q32NC0 220 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 SNX19Q92543 992 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 MGME1Q9BQP7 344 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 TBCDQ9BTW9 1192 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 ELOVL6Q9H5J4 265 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 NLE1Q9NVX2 485 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 COMMD8Q9NX08 183 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 OR56A5P0C7T3 313 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 HERVK_113P63132 956 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 KDM1BQ8NB78 822 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 OR2AP1Q8NGE2 309 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 SCAMP4Q969E2 229 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 ZFYVE19Q96K21 471 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 ERVK-6Q9BXR3 956 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 CXorf56Q9H5V9 222 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 ZNF212Q9UDV6 495 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 CLEC4EQ9ULY5 219 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 LOC285095A0A1B0GVY8 99 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 CD1DP15813 335 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 PTPN2P17706 415 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 SPAM1P38567 509 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 PPP3CCP48454 512 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 C1QTNF8P60827 252 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 LCP2Q13094 533 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 GPNMBQ14956 572 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 UNC50Q53HI1 259 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 ELMSAN1Q6PJG2 1045 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 GAREM2Q75VX8 874 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 DHDDSQ86SQ9 333 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 DCAF4L2Q8NA75 395 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 SH3KBP1Q96B97 665 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 ECSITQ9BQ95 431 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 TRMOQ9BU70 441 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 KLHL4Q9C0H6 718 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 CWH43Q9H720 699 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 IPPKQ9H8X2 491 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 S100A14Q9HCY8 104 aa12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 STX18Q9P2W9 335 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-208ENST00000585799 CCDC154A6NI56 674 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 HIDE1A8MVS5 230 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 WFS1O76024 890 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 VNN2O95498 520 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 PABPC1P11940 636 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 IL10P22301 178 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 HNF1BP35680 557 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 PGS1Q32NB8 556 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 ZNF678Q5SXM1 525 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 TMTC4Q5T4D3 741 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 ZNF549Q6P9A3 640 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 DPY19L3Q6ZPD9 716 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 ADAMTSL2Q86TH1 951 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 TRAPPC5Q8IUR0 188 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 ACDQ96AP0 544 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 CCDC28BQ9BUN5 200 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 SUV39H2Q9H5I1 410 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 NSUN3Q9H649 340 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 ARNT2Q9HBZ2 717 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 MRPL40Q9NQ50 206 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 INTS10Q9NVR2 710 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 INSL6Q9Y581 213 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 IGLV3-10A0A075B6K4 115 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 AXIN1O15169 862 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 GRM6O15303 877 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 CDK14O94921 469 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 PRAMEF12O95522 483 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 SERPIND1P05546 499 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 NELFEP18615 380 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 PEX2P28328 305 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 PTGER3P43115 390 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 ACTR3P61158 418 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 PLOD1Q02809 727 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 HSF5Q4G112 596 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 FBXL19Q6PCT2 694 aa12.33□□□□□ -0.44
SMARCA4-208ENST00000585799 CLEC14AQ86T13 490 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms