RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TFB2MQ9H5Q4 396 aaKnown RBP10.32□□□□□ -0.76
LIG3-203ENST00000585370 BPIFA1Q9NP55 256 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 NPHS2Q9NP85 383 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 IGSF5Q9NSI5 407 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 ZNF358Q9NW07 568 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 DLL3Q9NYJ7 618 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 PKD2L2Q9NZM6 624 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 KLHL42Q9P2K6 505 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 SUN2Q9UH99 717 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 IL36AQ9UHA7 158 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 APOBEC2Q9Y235 224 aaKnown RBP10.32□□□□□ -0.76
LIG3-203ENST00000585370 PIAS3Q9Y6X2 628 aa10.32□□□□□ -0.76
LIG3-203ENST00000585370 TICRRQ7Z2Z1 1910 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 COL4A2P08572 1712 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 GLYATL1P3A0A0U1RQE8 302 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 EDDM13A0A1B0GTR0 161 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 UBA6A0AVT1 1052 aaPredicted RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 AGAP14A8MT82 685 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 NPC1O15118 1278 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 BNIP3LO60238 219 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 CLDN7O95471 211 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 TOP3BO95985 862 aaKnown RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 UGT2B4P06133 528 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 ALPIP09923 528 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 TPBGLP0DKB5 382 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 ARSAP15289 507 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 TGM1P22735 817 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 XPAP23025 273 aaPredicted RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 FMO4P31512 558 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 VIPR1P32241 457 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 CDKN2DP55273 166 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 CORO7P57737 925 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 NFATC2Q13469 925 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 ITGA9Q13797 1035 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 ARHGEF7Q14155 803 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 GAS6Q14393 721 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 SEMA3AQ14563 771 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 PTPRNQ16849 979 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 RSPO4Q2I0M5 234 aaPredicted RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 ZNF805Q5CZA5 627 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 TECRLQ5HYJ1 363 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 PIWIL4Q7Z3Z4 852 aaKnown RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 LDB1Q86U70 411 aaPredicted RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 RBFAQ8N0V3 343 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 STON2Q8WXE9 905 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 PDLIM5Q96HC4 596 aaKnown RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 KLHL32Q96NJ5 620 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 GATA5Q9BWX5 397 aaPredicted RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 FAM126AQ9BYI3 521 aaPredicted RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 DERL2Q9GZP9 239 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 DRC3Q9H069 523 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 CLPBQ9H078 707 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 EBF3Q9H4W6 596 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 ASB8Q9H765 288 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 IL26Q9NPH9 171 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 NCKIPSDQ9NZQ3 722 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 NCDNQ9UBB6 729 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 NFKBIL1Q9UBC1 381 aaPredicted RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 VTI1BQ9UEU0 232 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 RRP15Q9Y3B9 282 aaKnown RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 OAS3Q9Y6K5 1087 aaKnown RBP10.31□□□□□ -0.76
LIG3-203ENST00000585370 MYLKQ15746 1914 aa10.31□□□□□ -0.76
LIG3-203ENST00000585370 EPG5Q9HCE0 2579 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 SDK1Q7Z5N4 2213 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 SYCE1LA8MT33 242 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 TTC34A8MYJ7 566 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 UPK3BL1B0FP48 263 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 UPK3BL2E5RIL1 263 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 DLX3O60479 287 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 HNRNPCL1O60812 293 aaKnown RBP10.3□□□□□ -0.76
LIG3-203ENST00000585370 CCDC22O60826 627 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 DNAJC6O75061 913 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 SMIM24O75264 130 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 LEFTY1O75610 366 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 IPO13O94829 963 aaKnown RBP10.3□□□□□ -0.76
LIG3-203ENST00000585370 PRAMEF1O95521 474 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 HSPA4LO95757 839 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 SLC4A1P02730 911 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 F7P08709 466 aaPredicted RBP10.3□□□□□ -0.76
LIG3-203ENST00000585370 SBK3P0C264 359 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 CD1DP15813 335 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 ZNF37AP17032 561 aaPredicted RBP10.3□□□□□ -0.76
LIG3-203ENST00000585370 BPIP17213 487 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 GKP32189 559 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 SOX9P48436 509 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 ZBTB16Q05516 673 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 GALNT1Q10472 559 aaPredicted RBP10.3□□□□□ -0.76
LIG3-203ENST00000585370 OVGP1Q12889 678 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 DLG1Q12959 904 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 PRKAA1Q13131 559 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 RCN2Q14257 317 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 GALNTL6Q49A17 601 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 ARSIQ5FYB1 569 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 CFAP157Q5JU67 520 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 TRIM68Q6AZZ1 485 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 PSAPL1Q6NUJ1 521 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 RAB44Q7Z6P3 723 aaPredicted RBP10.3□□□□□ -0.76
LIG3-203ENST00000585370 DSG4Q86SJ6 1040 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 ISCA2Q86U28 154 aa10.3□□□□□ -0.76
LIG3-203ENST00000585370 HOMEZQ8IX15 550 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms