RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 CAPNS1P04632 268 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 UGT1A6P19224 532 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 UGT1A1P22309 533 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 UGT1A4P22310 534 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 CA5AP35218 305 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 UGT1A3P35503 534 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 UGT1A5P35504 534 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 TMEM115Q12893 351 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-222ENST00000584908 NFATC2Q13469 925 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 NR1D2Q14995 579 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 ZNF648Q5T619 568 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-222ENST00000584908 UNQ6494/PRO21346Q6UXR6 183 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 CHST15Q7LFX5 561 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-222ENST00000584908 ZNF438Q7Z4V0 828 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 ZNF547Q8IVP9 402 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 SFTPA2Q8IWL1 248 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 TAB3Q8N5C8 712 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-222ENST00000584908 OR52K1Q8NGK4 314 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 MAPK15Q8TD08 544 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 CCDC3Q9BQI4 270 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 UGT1A7Q9HAW7 530 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 UGT1A10Q9HAW8 530 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 UGT1A8Q9HAW9 530 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 CASS4Q9NQ75 786 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 NLE1Q9NVX2 485 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-222ENST00000584908 RIMKLBQ9ULI2 386 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 CLCA2Q9UQC9 943 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 PRKAB1Q9Y478 270 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 ANKRD11Q6UB99 2663 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-222ENST00000584908 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.04■□□□□ 0.16
ERBB2-222ENST00000584908 FAM149AA5PLN7 773 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 A6NCN8 305 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 E7EVH7 732 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 KMOO15229 486 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 GPR39O43194 453 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 MTX2O75431 263 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 MT-CO3P00414 261 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 JUPP14923 745 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 TPH1P17752 444 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 TCP1P17987 556 aaKnown RBP16.04■□□□□ 0.16
ERBB2-222ENST00000584908 CLDN6P56747 220 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 TARDBPQ13148 414 aaKnown RBP eCLIP16.04■□□□□ 0.16
ERBB2-222ENST00000584908 GPRC6AQ5T6X5 926 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 PAPD7Q5XG87 772 aaKnown RBP16.04■□□□□ 0.16
ERBB2-222ENST00000584908 TTC27Q6P3X3 843 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 GSTA5Q7RTV2 222 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 C11orf96Q7Z7L8 435 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 LRRTM4Q86VH4 590 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 STYXQ8WUJ0 223 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 CCDC74AQ96AQ1 378 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 CNTNAP3BQ96NU0 1288 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 RANBP9Q96S59 729 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 TIMM29Q9BSF4 260 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 CNTNAP3Q9BZ76 1288 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 ZCCHC2Q9C0B9 1178 aaKnown RBP16.04■□□□□ 0.16
ERBB2-222ENST00000584908 ABCG4Q9H172 646 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 RABGEF1Q9UJ41 708 aa16.04■□□□□ 0.16
ERBB2-222ENST00000584908 KMT2BQ9UMN6 2715 aaPredicted RBP16.03■□□□□ 0.16
ERBB2-222ENST00000584908 TRBV5-4A0A0C4DH59 114 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 TMEM8BA6NDV4 472 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 C1QTNF9BB2RNN3 333 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 ECEL1O95672 775 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 APRTP07741 180 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 C1QTNF9P0C862 333 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 ACP5P13686 325 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 ZNF7P17097 686 aaPredicted RBP16.03■□□□□ 0.16
ERBB2-222ENST00000584908 COILP38432 576 aaPredicted RBP16.03■□□□□ 0.16
ERBB2-222ENST00000584908 GRIA1P42261 906 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 MAGEA6P43360 314 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 FASLGP48023 281 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 CDK16Q00536 496 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 LAMB3Q13751 1172 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 POU6F1Q14863 301 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 GPR33Q49SQ1 333 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 SNX20Q7Z614 316 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 SFRP1Q8N474 314 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 ARL14Q8N4G2 192 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 DNAAF3Q8N9W5 541 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 GDAP1Q8TB36 358 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 MAGOHBQ96A72 148 aaKnown RBP16.03■□□□□ 0.16
ERBB2-222ENST00000584908 ULK4Q96C45 1275 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 GRAMD1AQ96CP6 724 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 DNAJC1Q96KC8 554 aaKnown RBP16.03■□□□□ 0.16
ERBB2-222ENST00000584908 AP1M1Q9BXS5 423 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 ASB8Q9H765 288 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 PIH1D1Q9NWS0 290 aaKnown RBP16.03■□□□□ 0.16
ERBB2-222ENST00000584908 LRIT1Q9P2V4 623 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 DKK4Q9UBT3 224 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 TBC1D29Q9UFV1 150 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 NEU2Q9Y3R4 380 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 RNF215Q9Y6U7 377 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 PIKFYVEQ9Y2I7 2098 aa16.03■□□□□ 0.16
ERBB2-222ENST00000584908 HEATR9A2RTY3 570 aa16.02■□□□□ 0.16
ERBB2-222ENST00000584908 KCNJ13O60928 360 aa16.02■□□□□ 0.16
ERBB2-222ENST00000584908 GAS8O95995 478 aa16.02■□□□□ 0.16
ERBB2-222ENST00000584908 PROS1P07225 676 aa16.02■□□□□ 0.16
ERBB2-222ENST00000584908 TPSB2P20231 275 aa16.02■□□□□ 0.16
ERBB2-222ENST00000584908 LMAN1P49257 510 aa16.02■□□□□ 0.16
ERBB2-222ENST00000584908 FNTAP49354 379 aa16.02■□□□□ 0.16
ERBB2-222ENST00000584908 MAZP56270 477 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms