RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 LPOP22079 712 aaPredicted RBP24.62■■□□□ 1.53
TSEN54-209ENST00000583454 C3orf38Q5JPI3 329 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 ALS2CLQ60I27 953 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 RBM44Q6ZP01 1051 aaKnown RBP24.62■■□□□ 1.53
TSEN54-209ENST00000583454 GPR155Q7Z3F1 870 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 SDR16C5Q8N3Y7 309 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 SLC39A7Q92504 469 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 GRAMD1AQ96CP6 724 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 NAF1Q96HR8 494 aaKnown RBP24.62■■□□□ 1.53
TSEN54-209ENST00000583454 C19orf43Q9BQ61 176 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 CYP4F12Q9HCS2 524 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.62■■□□□ 1.53
TSEN54-209ENST00000583454 SSUH2Q9Y2M2 353 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 ARL5AQ9Y689 179 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 SAR1BQ9Y6B6 198 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 PIEZO2Q9H5I5 2752 aa24.62■■□□□ 1.53
TSEN54-209ENST00000583454 UNC13CQ8NB66 2214 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 TK2O00142 265 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 INPP4BO15327 924 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 BUD23O43709 281 aaKnown RBP24.61■■□□□ 1.53
TSEN54-209ENST00000583454 IVLP07476 585 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 POLD2P49005 469 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 RPIAP49247 311 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 TRIM74Q86UV6 250 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 CREG2Q8IUH2 290 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 KYQ8NBH2 561 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 NAT6Q93015 286 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 CCDC3Q9BQI4 270 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 RABGEF1Q9UJ41 708 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 PADI4Q9UM07 663 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 TMEM98Q9Y2Y6 226 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 PKP3Q9Y446 797 aa24.61■■□□□ 1.53
TSEN54-209ENST00000583454 OAS3Q9Y6K5 1087 aaKnown RBP24.61■■□□□ 1.53
TSEN54-209ENST00000583454 TEX51A0A1B0GUA7 166 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 NTN3O00634 580 aaPredicted RBP24.6■■□□□ 1.53
TSEN54-209ENST00000583454 STX7O15400 261 aaKnown RBP24.6■■□□□ 1.53
TSEN54-209ENST00000583454 PHF2O75151 1096 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 CRTAMO95727 393 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 CTSEP14091 401 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 CXADRP78310 365 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 PDE1BQ01064 536 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 PTPRCAPQ14761 206 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 ELOCQ15369 112 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 CCDC137Q6PK04 289 aaKnown RBP24.6■■□□□ 1.53
TSEN54-209ENST00000583454 PTCD2Q8WV60 388 aaKnown RBP24.6■■□□□ 1.53
TSEN54-209ENST00000583454 GLMNQ92990 594 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 SLC46A1Q96NT5 459 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 VPS18Q9P253 973 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 TMPRSS11EQ9UL52 423 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 KCTD3Q9Y597 815 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 PCDHGA8Q9Y5G5 932 aa24.6■■□□□ 1.53
TSEN54-209ENST00000583454 GOLGA6L10A0A0M3HER8 536 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 EIF4E1BA6NMX2 242 aaKnown RBP24.59■■□□□ 1.53
TSEN54-209ENST00000583454 E7EVH7 732 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 GAPDHSO14556 408 aaPredicted RBP24.59■■□□□ 1.53
TSEN54-209ENST00000583454 LDB2O43679 373 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 APRTP07741 180 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 TPH1P17752 444 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 SPAM1P38567 509 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 FNTAP49354 379 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 ZNF140P52738 457 aaPredicted RBP24.59■■□□□ 1.53
TSEN54-209ENST00000583454 ETF1P62495 437 aaKnown RBP24.59■■□□□ 1.53
TSEN54-209ENST00000583454 TCEA2Q15560 299 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 DOK6Q6PKX4 331 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 LVRNQ6Q4G3 990 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 ARL10Q8N8L6 244 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 LSM14AQ8ND56 463 aaKnown RBP24.59■■□□□ 1.53
TSEN54-209ENST00000583454 OR4K2Q8NGD2 314 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 OR52K1Q8NGK4 314 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 GLYATL1Q969I3 302 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 VPS35Q96QK1 796 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 TMEM168Q9H0V1 697 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 CARS2Q9HA77 564 aaKnown RBP24.59■■□□□ 1.53
TSEN54-209ENST00000583454 EIF2B3Q9NR50 452 aaKnown RBP24.59■■□□□ 1.53
TSEN54-209ENST00000583454 THSD1Q9NS62 852 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 TRNAU1APQ9NX07 287 aaKnown RBP24.59■■□□□ 1.53
TSEN54-209ENST00000583454 MOSPD1Q9UJG1 213 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 SUFUQ9UMX1 484 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 NEU2Q9Y3R4 380 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 AHCTF1Q8WYP5 2266 aa24.59■■□□□ 1.53
TSEN54-209ENST00000583454 ZNF106Q9H2Y7 1883 aaKnown RBP24.58■■□□□ 1.53
TSEN54-209ENST00000583454 COL6A6A6NMZ7 2263 aa24.58■■□□□ 1.53
TSEN54-209ENST00000583454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.58■■□□□ 1.53
TSEN54-209ENST00000583454 CDRT15L2A8MXV6 281 aa24.58■■□□□ 1.53
TSEN54-209ENST00000583454 GRIA1P42261 906 aa24.58■■□□□ 1.53
TSEN54-209ENST00000583454 LMAN1P49257 510 aa24.58■■□□□ 1.53
TSEN54-209ENST00000583454 CDH17Q12864 832 aa24.58■■□□□ 1.53
TSEN54-209ENST00000583454 ATP13A5Q4VNC0 1218 aa24.58■■□□□ 1.53
TSEN54-209ENST00000583454 CPNE5Q9HCH3 593 aa24.58■■□□□ 1.53
TSEN54-209ENST00000583454 CASS4Q9NQ75 786 aa24.58■■□□□ 1.53
TSEN54-209ENST00000583454 PIH1D1Q9NWS0 290 aaKnown RBP24.58■■□□□ 1.53
TSEN54-209ENST00000583454 GLYATL1P3A0A0U1RQE8 302 aa24.57■■□□□ 1.52
TSEN54-209ENST00000583454 KRT14P02533 472 aa24.57■■□□□ 1.52
TSEN54-209ENST00000583454 CHRNA6Q15825 494 aa24.57■■□□□ 1.52
TSEN54-209ENST00000583454 WDR48Q8TAF3 677 aa24.57■■□□□ 1.52
TSEN54-209ENST00000583454 GPBAR1Q8TDU6 330 aa24.57■■□□□ 1.52
TSEN54-209ENST00000583454 KCNE4Q8WWG9 221 aa24.57■■□□□ 1.52
TSEN54-209ENST00000583454 TRIM39Q9HCM9 518 aa24.57■■□□□ 1.52
TSEN54-209ENST00000583454 SIRPGQ9P1W8 387 aa24.57■■□□□ 1.52
TSEN54-209ENST00000583454 ASH1LQ9NR48 2969 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 437.4 ms