RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 GOLGA6BA6NDN3 693 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZNF487B1APH4 448 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 STMND1H3BQB6 276 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TERTO14746 1132 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SUV39H1O43463 412 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 HTRA2O43464 458 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CST8O60676 142 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SOCS5O75159 536 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SYF2O95926 243 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FGF1P05230 155 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CEACAM5P06731 702 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 GOLGA6DP0CG33 693 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CCL4P13236 92 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 GPR3P46089 330 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 GNPDA1P46926 289 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 HCAR3P49019 387 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NFKB2Q00653 900 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SLC10A7Q0GE19 358 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TRA2AQ13595 282 aaKnown RBP eCLIP9.66□□□□□ -0.861e-7■□□□□ 8.1
CDK5RAP3-227ENST00000583352 DPYSL3Q14195 570 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 OASLQ15646 514 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CNGA3Q16281 694 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZFYVE27Q5T4F4 411 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DENND2CQ68D51 928 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RAET1GQ6H3X3 334 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SLC30A9Q6PML9 568 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 VSIG1Q86XK7 387 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NRROSQ86YC3 692 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PSTKQ8IV42 348 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 BBS5Q8N3I7 341 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NPWQ8N729 165 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RCBTB1Q8NDN9 531 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 GRK7Q8WTQ7 553 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PDCD6IPQ8WUM4 868 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SPOCK2Q92563 424 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FAF2Q96CS3 445 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DTD2Q96FN9 168 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CCDC74BQ96LY2 380 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RNF157Q96PX1 679 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TAAR9Q96RI9 348 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FAM118BQ9BPY3 351 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NUDT22Q9BRQ3 303 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TEX101Q9BY14 249 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FRMD8Q9BZ67 464 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FAM129AQ9BZQ8 928 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TRIM31Q9BZY9 425 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PCDH18Q9HCL0 1135 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 GOLGA6AQ9NYA3 693 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 WHRNQ9P202 907 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PHTF1Q9UMS5 762 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PCDHGC4Q9Y5F7 938 aa9.66□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ARHGEF17Q96PE2 2063 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 AHCTF1Q8WYP5 2266 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 IGHV5-10-1A0A0J9YXX1 117 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TTC24A2A3L6 582 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 H3BQF6 201 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PSMD11O00231 422 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 IVLP07476 585 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 WT1P19544 449 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 AK4P27144 223 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TEAD1P28347 426 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CD1CP29017 333 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ETV3P41162 512 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 LIMK2P53671 638 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PLTPP55058 493 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CDH6P55285 790 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CYP4F2P78329 520 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CBX1P83916 185 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CDK3Q00526 305 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CTBSQ01459 385 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 MMRN1Q13201 1228 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DPYSQ14117 519 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 UAP1Q16222 522 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ODF2Q5BJF6 829 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZNF574Q6ZN55 896 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 HSD11B1LQ7Z5J1 315 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 MAP7D3Q8IWC1 876 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 IL22RA1Q8N6P7 574 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PQLC3Q8N755 202 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PLD5Q8N7P1 536 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TTC13Q8NBP0 860 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 AGBL5Q8NDL9 886 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NSMCE1Q8WV22 266 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 HTR3CQ8WXA8 447 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 JPH3Q8WXH2 748 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 HSPH1Q92598 858 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NKD1Q969G9 470 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 LRRC45Q96CN5 670 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NSMCE3Q96MG7 304 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NUDCD1Q96RS6 583 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DPYSL5Q9BPU6 564 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CDH19Q9H159 772 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SLC25A18Q9H1K4 315 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ADNPQ9H2P0 1102 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 GEMIN8Q9NWZ8 242 aaKnown RBP9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CWC15Q9P013 229 aaKnown RBP9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SUFUQ9UMX1 484 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PCDHGA3Q9Y5H0 932 aa9.65□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NFS1Q9Y697 457 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms