RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 PIANPQ8IYJ0 282 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 KIAA2013Q8IYS2 634 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 UNC5BQ8IZJ1 945 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 NXPE1Q8N323 547 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 OXR1Q8N573 874 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
GGA3-216ENST00000583282 DDHD1Q8NEL9 900 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 SEC14L1Q92503 715 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 PEX13Q92968 403 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 FAM122AQ96E09 287 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 LRRC61Q9BV99 259 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 ZCCHC2Q9C0B9 1178 aaKnown RBP13.88□□□□□ -0.19
GGA3-216ENST00000583282 TMEM9BQ9NQ34 198 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 ZDHHC18Q9NUE0 388 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 MARCH4Q9P2E8 410 aaPredicted RBP13.88□□□□□ -0.19
GGA3-216ENST00000583282 ATXN10Q9UBB4 475 aa13.88□□□□□ -0.19
GGA3-216ENST00000583282 MTRF1LQ9UGC7 380 aaKnown RBP13.88□□□□□ -0.19
GGA3-216ENST00000583282 ZC3H7BQ9UGR2 993 aaKnown RBP13.88□□□□□ -0.19
GGA3-216ENST00000583282 PCYT1BQ9Y5K3 369 aaPredicted RBP13.88□□□□□ -0.19
GGA3-216ENST00000583282 A0A1B0GTQ1 180 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 BHMG1C9JSJ3 638 aaPredicted RBP13.87□□□□□ -0.19
GGA3-216ENST00000583282 E7ESA3 106 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 FFAR2O15552 330 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 CEACAM5P06731 702 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 POLBP06746 335 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 HOXC4P09017 264 aaPredicted RBP13.87□□□□□ -0.19
GGA3-216ENST00000583282 NME1P15531 152 aaKnown RBP13.87□□□□□ -0.19
GGA3-216ENST00000583282 ZNF8P17098 575 aaPredicted RBP13.87□□□□□ -0.19
GGA3-216ENST00000583282 ARRB1P49407 418 aaPredicted RBP13.87□□□□□ -0.19
GGA3-216ENST00000583282 DRG2P55039 364 aaKnown RBP13.87□□□□□ -0.19
GGA3-216ENST00000583282 C1orf61Q13536 156 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 SHBQ15464 509 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 LDLRAP1Q5SW96 308 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 UNC5AQ6ZN44 842 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 GALNT13Q8IUC8 556 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 TRAPPC5Q8IUR0 188 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 OR4L1Q8NH43 312 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 LMX1AQ8TE12 382 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 DCUN1D1Q96GG9 259 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 C9orf72Q96LT7 481 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 OR2M4Q96R27 311 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 FMO2Q99518 471 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 C19orf43Q9BQ61 176 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 BOCQ9BWV1 1114 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 SLC13A1Q9BZW2 595 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 RRAGDQ9NQL2 400 aaPredicted RBP13.87□□□□□ -0.19
GGA3-216ENST00000583282 C20orf96Q9NUD7 363 aaPredicted RBP13.87□□□□□ -0.19
GGA3-216ENST00000583282 SLC17A6Q9P2U8 582 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 SLC17A4Q9Y2C5 497 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 TEX264Q9Y6I9 313 aa13.87□□□□□ -0.19
GGA3-216ENST00000583282 ZCWPW2A0A1B0GU75 182 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.86□□□□□ -0.19
GGA3-216ENST00000583282 OR2AG2A6NM03 316 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 PIAS2O75928 621 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 TNFP01375 233 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 CSF2P04141 144 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 IVLP07476 585 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 ACP5P13686 325 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 PSMA3P25788 255 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 ECHS1P30084 290 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 PLA2G5P39877 138 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 HK3P52790 923 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 CTSCP53634 463 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 CUL1Q13616 776 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 THOC5Q13769 683 aaKnown RBP13.86□□□□□ -0.19
GGA3-216ENST00000583282 LONRF1Q17RB8 773 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 PRRT3Q5FWE3 981 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 SPANXN3Q5MJ09 141 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 ZNF470Q6ECI4 717 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 TMEM135Q86UB9 458 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 KCNMB4Q86W47 210 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 IFT20Q8IY31 132 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 ZNF548Q8NEK5 533 aaPredicted RBP13.86□□□□□ -0.19
GGA3-216ENST00000583282 LRRC39Q96DD0 335 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 TTC25Q96NG3 672 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 COPS8Q99627 209 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 ERVMER34-1Q9H9K5 563 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 PPANQ9NQ55 473 aaKnown RBP13.86□□□□□ -0.19
GGA3-216ENST00000583282 TM7SF3Q9NS93 570 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 UCKL1Q9NWZ5 548 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 ZDHHC3Q9NYG2 299 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 VPS18Q9P253 973 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 FAM8A1Q9UBU6 413 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 NFU1Q9UMS0 254 aa13.86□□□□□ -0.19
GGA3-216ENST00000583282 ZFC3H1O60293 1989 aaKnown RBP13.85□□□□□ -0.19
GGA3-216ENST00000583282 TRBV5-4A0A0C4DH59 114 aa13.85□□□□□ -0.19
GGA3-216ENST00000583282 UBA6A0AVT1 1052 aaPredicted RBP13.85□□□□□ -0.19
GGA3-216ENST00000583282 MAGEB16A2A368 324 aa13.85□□□□□ -0.19
GGA3-216ENST00000583282 C4orf47A7E2U8 309 aa13.85□□□□□ -0.19
GGA3-216ENST00000583282 CFAP99D6REC4 459 aa13.85□□□□□ -0.19
GGA3-216ENST00000583282 EIF3HO15372 352 aaKnown RBP eCLIP13.85□□□□□ -0.198e-7■■■■■ 29.8
GGA3-216ENST00000583282 CD3EAPO15446 510 aaKnown RBP13.85□□□□□ -0.19
GGA3-216ENST00000583282 DNAJC6O75061 913 aa13.85□□□□□ -0.19
GGA3-216ENST00000583282 CDK14O94921 469 aa13.85□□□□□ -0.19
GGA3-216ENST00000583282 TTC4O95801 387 aa13.85□□□□□ -0.19
GGA3-216ENST00000583282 FUCA1P04066 466 aa13.85□□□□□ -0.19
GGA3-216ENST00000583282 ERVK-10P10266 1014 aa13.85□□□□□ -0.19
GGA3-216ENST00000583282 CTSEP14091 401 aa13.85□□□□□ -0.19
GGA3-216ENST00000583282 ARCN1P48444 511 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms